ENSPPYG00000006452 (Pongo pygmaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPPYG00000006452 T40482_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000007310 RRM 102 172
ENSPPYP00000007310 RRM 235 304
ENSPPYP00000007310 RRM 525 593
ENSPPYP00000007311 RRM 102 172
ENSPPYP00000007311 RRM 235 304
ENSPPYP00000007311 RRM 501 569

Links

Other RRM family RBPs
Other Pongo pygmaeus RBPs

79 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A6QQP0_BOVIN Bos taurus ENSBTAG00000008771 N 1.000
AAI08588 Xenopus laevis AAI08588 N 0.905
AAI34826 Xenopus laevis AAI34826 N 0.730
Ame_R005511 Ailuropoda melanoleuca Ame_R005511 N 1.000
Ame_R017061 Ailuropoda melanoleuca Ame_R017061 N 0.773
ENSDORG00000015835 Dipodomys ordii ENSDORG00000015835 N 0.995
ENSOCUG00000000552 Oryctolagus cuniculus ENSOCUG00000000552 N 0.773
ENSOCUG00000024611 Oryctolagus cuniculus ENSOCUG00000024611 N 0.773
ENSPPYG00000009506 Pongo pygmaeus ENSPPYG00000009506 N 0.773
Gm9833 Mus musculus ENSMUSG00000049230 N 0.790
HNRNPM Dasypus novemcinctus ENSDNOG00000012157 N 0.708
HNRNPM Meleagris gallopavo ENSMGAG00000000700 N 0.755
HNRNPM Microcebus murinus ENSMICG00000002532 N 0.754
HNRNPM Myotis lucifugus ENSMLUG00000006696 N 0.768
HNRNPM Ochotona princeps ENSOPRG00000001943 N 0.722
Hnrnpm Mus musculus ENSMUSG00000059208 N 0.768
HNRNPM Tupaia belangeri ENSTBEG00000008718 N 0.758
HNRNPM Spermophilus tridecemlineatus ENSSTOG00000008112 N 0.724
HNRNPM Sus scrofa ENSSSCG00000013602 N 0.773
HNRNPM Oryzias latipes ENSORLG00000005400 N 0.733
HNRNPM Callithrix jacchus ENSCJAG00000010802 N 0.768
HNRNPM Canis familiaris ENSCAFG00000018524 N 0.773
HNRNPM Sorex araneus ENSSARG00000000267 N 0.741
HNRNPM Macropus eugenii ENSMEUG00000004789 N 0.708
HNRNPM Tetraodon nigroviridis ENSTNIG00000015530 N 0.714
HNRNPM Macaca mulatta ENSMMUG00000018806 N 0.773
HNRNPM Cavia porcellus ENSCPOG00000015182 N 0.773
HNRNPM Equus caballus ENSECAG00000023868 N 0.773
HNRNPM Pan troglodytes ENSPTRG00000010424 N 0.773
HNRNPM Echinops telfairi ENSETEG00000019712 N 0.773
HNRNPM Homo sapiens ENSG00000099783 N 0.773
HNRNPM Tursiops truncatus ENSTTRG00000009769 N 0.773
HNRNPM Gasterosteus aculeatus ENSGACG00000010265 N 0.743
HNRNPM Loxodonta africana ENSLAFG00000013603 N 0.773
HNRNPM Takifugu rubripes ENSTRUG00000013783 N 0.719
HNRNPM Gorilla gorilla ENSGGOG00000003498 N 0.773
HNRNPM Choloepus hoffmanni ENSCHOG00000013627 N 0.773
HNRNPM Procavia capensis ENSPCAG00000009678 N 0.763
Hnrpm Rattus norvegicus ENSRNOG00000007921 N 0.773
LOC100070256 Equus caballus ENSECAG00000005741 N 1.000
Myef2 Rattus norvegicus ENSRNOG00000005258 N 0.995
MYEF2 Sorex araneus ENSSARG00000003264 N 0.881
MYEF2 Pteropus vampyrus ENSPVAG00000004102 N 0.776
MYEF2 Spermophilus tridecemlineatus ENSSTOG00000007740 N 0.786
MYEF2 Taeniopygia guttata ENSTGUG00000007130 N 0.995
MYEF2 Tetraodon nigroviridis ENSTNIG00000009526 N 0.896
MYEF2 Tursiops truncatus ENSTTRG00000008076 N 1.000
MYEF2 Takifugu rubripes ENSTRUG00000016967 N 0.887
MYEF2 Tarsius syrichta ENSTSYG00000010575 N 0.933
MYEF2 Vicugna pacos ENSVPAG00000004721 N 1.000
myef2 Xenopus tropicalis ENSXETG00000018412 N 0.910
MYEF2 Sus scrofa ENSSSCG00000004661 N 0.990
MYEF2 Pan troglodytes ENSPTRG00000007042 N 1.000
MYEF2 Procavia capensis ENSPCAG00000016660 N 1.000
MYEF2 Loxodonta africana ENSLAFG00000012990 N 0.995
MYEF2 Gorilla gorilla ENSGGOG00000014968 N 0.995
MYEF2 Gasterosteus aculeatus ENSGACG00000016759 N 0.886
MYEF2 Homo sapiens ENSG00000104177 N 1.000
MYEF2 Erinaceus europaeus ENSEEUG00000006405 N 0.700
myef2 Danio rerio ENSDARG00000059398 N 0.867
MYEF2 Cavia porcellus ENSCPOG00000010584 N 0.953
MYEF2 Callithrix jacchus ENSCJAG00000001875 N 0.995
MYEF2 Canis familiaris ENSCAFG00000014008 N 1.000
MYEF2 Meleagris gallopavo ENSMGAG00000006915 N 1.000
MYEF2 Myotis lucifugus ENSMLUG00000006781 N 0.762
MYEF2 Macaca mulatta ENSMMUG00000018834 N 1.000
MYEF2 Oryzias latipes ENSORLG00000002730 N 0.886
MYEF2 Ochotona princeps ENSOPRG00000003919 N 0.876
MYEF2 Otolemur garnettii ENSOGAG00000010907 N 0.895
MYEF2 Oryctolagus cuniculus ENSOCUG00000013043 N 1.000
MYEF2 Ornithorhynchus anatinus ENSOANG00000007375 N 0.748
MYEF2 Anolis carolinensis ENSACAG00000004806 N 0.952
Myef2 Mus musculus ENSMUSG00000027201 N 0.990
MYEF2 Monodelphis domestica ENSMODG00000002744 N 0.914
Q3SYX2_BOVIN Bos taurus ENSBTAG00000021039 N 0.773
Q5ZHY2_CHICK Gallus gallus ENSGALG00000004905 N 1.000
Q5ZL80_CHICK Gallus gallus ENSGALG00000000377 N 0.764
XM_001365870.1 Monodelphis domestica ENSMODG00000003801 N 0.773