estExt_Genewise1_worm.C_60324 (Laccaria bicolor)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1_worm.C_60324 T51546_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1_worm.C_60324 RRM 36 112

Links

Other RRM family RBPs
Other Laccaria bicolor RBPs

53 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
2118330B Xenopus laevis 2118330B N 0.000
AAH72902 Xenopus laevis AAH72902 N 0.000
ACLA_080400 Aspergillus clavatus CADACLAG00007885 N 0.000
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.701
AMAG_02834 Allomyces macrogynus AMAG_02834 N 0.000
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.000
An12g03930 Aspergillus niger CADANGAG00009835 N 0.701
Aqu1.228507 Amphimedon queenslandica Aqu1.228507 N 0.000
ATEG_09693 Aspergillus terreus CADATEAG00004149 N 0.000
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.000
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.727
BDBG_08091 Blastomyces dermatitidis BDBG_08091 N 0.714
CAA59259 Xenopus laevis CAA59259 N 0.000
CAOG_06930 Capsaspora owczarzaki CAOG_06930 N 0.000
cbc2 Schizosaccharomyces pombe SPBC13A2.01c N 0.000
CHGG_03355 Chaetomium globosum CHGG_03355 N 0.000
CIMG_00837 Coccidioides immitis CIMG_00837 N 0.714
CPSG_08054 Coccidioides posadasii CPSG_08054 N 0.714
DGIL_AUG5s12516g4t1 Acyrtosiphon pisum DGIL_AUG5s12516g4t1 N 0.000
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.701
EFA74823.1 Polysphondylium pallidum EFA74823.1 N 0.000
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.000
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.000
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.701
estExt_fgenesh1_pm.C_20437 Schizophyllum commune estExt_fgenesh1_pm.C_20437 N 0.935
estExt_fgenesh2_kg.C_120041 Serpula lacrymans estExt_fgenesh2_kg.C_120041 N 1.000
estExt_fgenesh2_kg.C_20664 Agaricus bisporus estExt_fgenesh2_kg.C_20664 N 0.896
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.701
estExt_Genewise1.C_sca_180152 Lottia gigantea estExt_Genewise1.C_sca_180152 N 0.000
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.701
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.714
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.714
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.727
e_gw1.121.83.1 Postia placenta e_gw1.121.83.1 N 0.896
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.740
e_gw1.18.125.1 Batrachochytrium dendrobatidis e_gw1.18.125.1 N 0.000
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.714
e_gw1.40.70.1 Melampsora laricis populina e_gw1.40.70.1 N 0.701
fgenesh1_pg.C_scaffold_1000747 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1000747 N 0.000
fgenesh1_pm.00772_#_82 Aspergillus carbonarius fgenesh1_pm.00772_#_82 N 0.701
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.714
FGSG_05488 Fusarium graminearum FGSG_05488 N 0.000
FOXG_09405 Fusarium oxysporum FOXG_09405 N 0.000
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.714
GF16759 Drosophila ananassae FBgn0093780 N 0.000
GH15101 Drosophila grimshawi FBgn0122576 N 0.000
GI23717 Drosophila mojavensis FBgn0146442 N 0.000
GID1.0044779 Dictyostelium purpureum GID1.0044779 N 0.000
GJ23276 Drosophila virilis FBgn0210378 N 0.000
GK11244 Drosophila willistoni FBgn0213255 N 0.000
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.701
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.714
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.714
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.714
gw1.1.1171.1 Sporobolomyces roseus gw1.1.1171.1 N 0.714
gw1.1.2136.1 Pleurotus ostreatus gw1.1.2136.1 N 0.961
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.727
gwh2.1.1054.1 Phanerochaete chrysosporium gwh2.1.1054.1 N 0.909
HCAG_07341 Histoplasma capsulatum HCAG_07341 N 0.714
MCYG_04468 Microsporum canis MCYG_04468 N 0.714
MGG_06296 Magnaporthe oryzae MGG_06296 N 0.000
MGYG_02166 Microsporum gypseum MGYG_02166 N 0.714
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.000
NCBP2 Oryzias latipes ENSORLG00000011235 N 0.000
ncbp2 Danio rerio ENSDARG00000014898 N 0.000
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.000
ncbp2 Dictyostelium discoideum DDB_G0287197 N 0.000
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.000
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.000
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.000
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.000
NCU00210 Neurospora crassa NCU00210 N 0.714
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.701
P52299 Xenopus laevis P52299 N 0.000
PABG_07236 Paracoccidioides brasiliensis PABG_07236 N 0.714
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.701
Pc13g04070 Penicillium chrysogenum Pc13g04070 N 0.701
PGTG_01720 Puccinia graminis PGTG_01720 N 0.000
PHUM535920 Pediculus humanus PHUM535920 N 0.000
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.701
PredSwiss_ASS2010_2397.2 Pneumocystis carinii PredSwiss_ASS2010_2397.2 N 0.000
PredSwiss_CON682.3 Pneumocystis carinii PredSwiss_CON682.3 N 0.000
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.701
SJAG_01064 Schizosaccharomyces japonicus SJAG_01064 N 0.727
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.701
SOCG_01831 Schizosaccharomyces octosporus SOCG_01831 N 0.000
SPOG_01217 Schizosaccharomyces cryophilus SPOG_01217 N 0.000
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.714
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.727
TEQG_01953 Trichophyton equinum TEQG_01953 N 0.714
TERG_03424 Trichophyton rubrum TERG_03424 N 0.714
TESG_01120 Trichophyton tonsurans TESG_01120 N 0.701
VDAG_05874 Verticillium dahliae VDAG_05874 N 0.000
VDBG_06810 Verticillium albo atrum VDBG_06810 N 0.000