fgenesh1_pg.C_scaffold_2000543 (Melampsora laricis populina)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 fgenesh1_pg.C_scaffold_2000543 T61215_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
eIF-2alpha
M231_0.6 		Drosophila melanogaster WGCAUG RNAcompete
Ray et al.(2013)
RNCMPT00273 		0.776
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_2000543 S1 9 83

Links

Other S1 family RBPs
Other Melampsora laricis populina RBPs

266 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R018576 Ailuropoda melanoleuca Ame_R018576 N 0.000
ENSACAG00000017034 Anolis carolinensis ENSACAG00000017034 N 0.000
ENSBTAG00000020419 Bos taurus ENSBTAG00000020419 N 0.000
ENSCJAG00000020956 Callithrix jacchus ENSCJAG00000020956 N 0.000
ENSCPOG00000004227 Cavia porcellus ENSCPOG00000004227 N 0.000
ENSEEUG00000002115 Erinaceus europaeus ENSEEUG00000002115 N 0.000
ENSETEG00000005141 Echinops telfairi ENSETEG00000005141 N 0.000
ENSGGOG00000011962 Gorilla gorilla ENSGGOG00000011962 N 0.000
ENSLAFG00000009326 Loxodonta africana ENSLAFG00000009326 N 0.000
ENSLAFG00000018654 Loxodonta africana ENSLAFG00000018654 N 0.000
ENSMGAG00000014689 Meleagris gallopavo ENSMGAG00000014689 N 0.000
ENSMICG00000003211 Microcebus murinus ENSMICG00000003211 N 0.000
ENSMLUG00000009780 Myotis lucifugus ENSMLUG00000009780 N 0.000
ENSOANG00000002571 Ornithorhynchus anatinus ENSOANG00000002571 N 0.000
ENSOCUG00000004295 Oryctolagus cuniculus ENSOCUG00000004295 N 0.000
ENSPPYG00000020150 Pongo pygmaeus ENSPPYG00000020150 N 0.000
ENSPVAG00000010216 Pteropus vampyrus ENSPVAG00000010216 N 0.000
ENSTBEG00000008533 Tupaia belangeri ENSTBEG00000008533 N 0.000
ENSTSYG00000005278 Tarsius syrichta ENSTSYG00000005278 N 0.000
ENSVPAG00000007641 Vicugna pacos ENSVPAG00000007641 N 0.000
Q9W6Q9_FUGRU Takifugu rubripes ENSTRUG00000017089 N 0.000
XM_001380899.1 Monodelphis domestica ENSMODG00000017202 N 0.000
XM_542254.2 Canis familiaris ENSCAFG00000025134 N 0.000
XM_548872.2 Canis familiaris ENSCAFG00000012201 N 0.000
Zrsr1 Mus musculus ENSMUSG00000044068 N 0.000
Zrsr1 Rattus norvegicus ENSRNOG00000009639 N 0.000
ZRSR1 Homo sapiens ENSG00000212643 N 0.000
ZRSR1 Pan troglodytes ENSPTRG00000017138 N 0.000
Zrsr1 Dipodomys ordii ENSDORG00000001238 N 0.000
ZRSR2 Tetraodon nigroviridis ENSTNIG00000009495 N 0.000
zrsr2 Danio rerio ENSDARG00000058448 N 0.000
ZRSR2 Taeniopygia guttata ENSTGUG00000007964 N 0.000
ZRSR2 Homo sapiens ENSG00000169249 N 0.000
Zrsr2 Rattus norvegicus ENSRNOG00000033176 N 0.000
ZRSR2 Gasterosteus aculeatus ENSGACG00000015069 N 0.000
ZRSR2 Pan troglodytes ENSPTRG00000021693 N 0.000
ZRSR2 Gallus gallus ENSGALG00000016552 N 0.000
Zrsr2 Mus musculus ENSMUSG00000031370 N 0.000
ZRSR2 Macaca mulatta ENSMMUG00000014054 N 0.000