SJAG_03191 (Schizosaccharomyces japonicus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 SJAG_03191 T01565_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SJAG_03191T0 CCCH ZF 54 77
SJAG_03191T0 CCCH ZF 80 104

Links

Other CCCH ZF family RBPs
Other Schizosaccharomyces japonicus RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB08315.1 Alternaria brassicicola AB08315.1 N 0.725
ADR062W Ashbya gossypii ADR062W N 0.706
ANIA_03447 Aspergillus nidulans CADANIAG00009587 N 0.712
orf19.7385 Candida albicans orf19.7385 N 0.720
Cd36_85970 Candida dubliniensis Cd36_85970 N 0.720
CLUG_02022 Candida lusitaniae CLUG_02022 N 0.700
CTRG_02259 Candida tropicalis CTRG_02259 N 0.706
CHGG_00049 Chaetomium globosum CHGG_00049 N 0.720
estExt_fgenesh1_pg.C_160206 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_160206 N 0.725
GLRG_01727 Colletotrichum graminicola GLRG_01727 N 0.720
FOXG_04082 Fusarium oxysporum FOXG_04082 N 0.720
FVEG_07196 Fusarium verticillioides FVEG_07196 N 0.720
SAKL0H10846g Lachancea kluyveri SAKL0H10846g N 0.765
MGG_03480 Magnaporthe oryzae MGG_03480 N 0.720
gw1.2.2109.1 Mucor circinelloides gw1.2.2109.1 N 0.700
estExt_fgenesh1_kg.C_60003 Myceliophthora thermophila estExt_fgenesh1_kg.C_60003 N 0.700
gw1.28.197.1 Nectria haematococca gw1.28.197.1 N 0.720
NCU05007 Neurospora crassa NCU05007 N 0.700
estExt_Genewise1Plus.C_130028 Neurospora discreta estExt_Genewise1Plus.C_130028 N 0.700
estExt_Genewise1.C_110035 Neurospora tetrasperma estExt_Genewise1.C_110035 N 0.700
EAT89389.2 Phaeosphaeria nodorum EAT89389.2 N 0.725
XP_002493509.1 Pichia pastoris XP_002493509.1 N 0.700
e_gwh1.2.1.2495.1 Pichia stipitis e_gwh1.2.1.2495.1 N 0.700
Pa_5_7490 Podospora anserina Pa_5_7490 N 0.720
PTRG_01963 Pyrenophora tritici repentis PTRG_01963 N 0.725
Scas_Contig567.6 Saccharomyces castellii Scas_Contig567.6 N 0.706
SPOG_02388 Schizosaccharomyces cryophilus SPOG_02388 N 0.840
SJAG_01535 Schizosaccharomyces japonicus SJAG_01535 N 0.760
SOCG_02788 Schizosaccharomyces octosporus SOCG_02788 N 0.820
SPCC1739.01 Schizosaccharomyces pombe SPCC1739.01 N 0.820
cps3 Schizosaccharomyces pombe SPAC3A11.02 N 0.700
SNOG_02658 Stagonospora nodorum SNOG_02658 N 0.725
estExt_Genewise1.C_81229 Thielavia terrestris estExt_Genewise1.C_81229 N 0.700
estExt_Genewise1.C_60695 Trichoderma atroviride estExt_Genewise1.C_60695 N 0.720
estExt_fgenesh5_pg.C_100355 Trichoderma reesei estExt_fgenesh5_pg.C_100355 N 0.720
e_gw1.29.29.1 Trichoderma virens e_gw1.29.29.1 N 0.720
GSTUMT00003772001 Tuber melanosporum GSTUMT00003772001 N 0.706
VDBG_09822 Verticillium albo atrum VDBG_09822 N 0.700
VDAG_09556 Verticillium dahliae VDAG_09556 N 0.700
YALI0B12540g Yarrowia lipolytica YALI0B12540g N 0.700