KHSRP (Loxodonta africana)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSLAFG00000002426 T18918_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHSRP
M341_0.6 		Homo sapiens Sequence logo not available nUGUrUrU RIP-chip
Cook et al.(2011)
906_17437629.2 		0.996
KHSRP
M340_0.6 		Homo sapiens Sequence logo not available UwUAUUUw RIP-chip
Cook et al.(2011)
906_17437629.1 		0.996
KHSRP
M339_0.6 		Homo sapiens Sequence logo not available UAUUUAUw RIP-chip
Cook et al.(2011)
906_17437629 		0.996
KHSRP
M342_0.6 		Homo sapiens Sequence logo not available CnsCyUCC RIP-chip
Cook et al.(2011)
906_17437629.3 		0.996
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000002029 KH 63 125
ENSLAFP00000002029 KH 152 216
ENSLAFP00000002029 KH 241 303
ENSLAFP00000002029 KH 343 408
ENSLAFP00000026615 KH 66 128
ENSLAFP00000026615 KH 155 219
ENSLAFP00000026615 KH 244 306
ENSLAFP00000026615 KH 346 411
ENSLAFP00000027833 KH 63 125
ENSLAFP00000027833 KH 152 216
ENSLAFP00000027833 KH 241 303
ENSLAFP00000027833 KH 343 408

Links

Other KH family RBPs
Other Loxodonta africana RBPs

80 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R001963 Ailuropoda melanoleuca Ame_R001963 N 0.000
MKRN1 Anolis carolinensis ENSACAG00000010934 N 0.000
A2VDX6_BOVIN Bos taurus ENSBTAG00000008306 N 0.000
MKRN1 Callithrix jacchus ENSCJAG00000004068 N 0.000
ENSCAFG00000003953 Canis familiaris ENSCAFG00000003953 N 0.000
ENSCPOG00000000948 Cavia porcellus ENSCPOG00000000948 N 0.000
MKRN1 Choloepus hoffmanni ENSCHOG00000011015 N 0.000
mkrn1 Danio rerio ENSDARG00000041665 N 0.000
MKRN1 Dasypus novemcinctus ENSDNOG00000019564 N 0.000
MKRN1 Echinops telfairi ENSETEG00000007348 N 0.000
LOC100065893 Equus caballus ENSECAG00000017929 N 0.000
MKRN1 Felis catus ENSFCAG00000013043 N 0.000
Q9PTI4_CHICK Gallus gallus ENSGALG00000012852 N 0.000
MKRN1 Gasterosteus aculeatus ENSGACG00000019227 N 0.000
ENSGGOG00000023977 Gorilla gorilla ENSGGOG00000023977 N 0.000
ENSGGOG00000024940 Gorilla gorilla ENSGGOG00000024940 N 0.000
MKRN1 Homo sapiens ENSG00000133606 N 0.000
MKRN1 Loxodonta africana ENSLAFG00000018408 N 0.000
MKRN1 Macaca mulatta ENSMMUG00000010420 N 0.000
ENSMMUG00000001017 Macaca mulatta ENSMMUG00000001017 N 0.000
MKRN1_MACEU Macropus eugenii ENSMEUG00000007399 N 0.000
MKRN1 Meleagris gallopavo ENSMGAG00000013208 N 0.000
MKRN1 Microcebus murinus ENSMICG00000002114 N 0.000
ENSMODG00000013686 Monodelphis domestica ENSMODG00000013686 N 0.000
Mkrn1 Mus musculus ENSMUSG00000029922 N 0.000
MKRN1 Myotis lucifugus ENSMLUG00000006053 N 0.000
MKRN1 Ochotona princeps ENSOPRG00000010353 N 0.000
ENSOCUG00000010180 Oryctolagus cuniculus ENSOCUG00000010180 N 0.000
ENSOCUG00000021607 Oryctolagus cuniculus ENSOCUG00000021607 N 0.000
ENSOCUG00000013132 Oryctolagus cuniculus ENSOCUG00000013132 N 0.000
MKRN1 Oryzias latipes ENSORLG00000012765 N 0.000
ENSOGAG00000009877 Otolemur garnettii ENSOGAG00000009877 N 0.000
XR_024878.1 Pan troglodytes ENSPTRG00000019766 N 0.000
ENSPPYG00000018057 Pongo pygmaeus ENSPPYG00000018057 N 0.000
ENSPPYG00000020255 Pongo pygmaeus ENSPPYG00000020255 N 0.000
MKRN1 Procavia capensis ENSPCAG00000014683 N 0.000
MKRN1 Pteropus vampyrus ENSPVAG00000011185 N 0.000
Q68FR1_RAT Rattus norvegicus ENSRNOG00000009280 N 0.000
MKRN1 Sorex araneus ENSSARG00000013683 N 0.000
MKRN1 Sus scrofa ENSSSCG00000016498 N 0.000
MKRN1 Taeniopygia guttata ENSTGUG00000011669 N 0.000
NP_001072050.1 Takifugu rubripes ENSTRUG00000012057 N 0.000
MKRN1 Tarsius syrichta ENSTSYG00000009996 N 0.000
MKRN1 Tetraodon nigroviridis ENSTNIG00000007231 N 0.000
MKRN1 Tupaia belangeri ENSTBEG00000004564 N 0.000
MKRN1 Tursiops truncatus ENSTTRG00000009528 N 0.000
AAH74368 Xenopus laevis AAH74368 N 0.000
Q6GLT5 Xenopus laevis Q6GLT5 N 0.000