MEX3B (Otolemur garnettii)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSOGAG00000016362 T19238_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG11360
M122_0.6 		Drosophila melanogaster GAGUDW RNAcompete
Ray et al.(2013)
RNCMPT00129 		0.702
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000014646 KH 1 41
ENSOGAP00000014646 KH 76 134

Links

Other KH family RBPs
Other Otolemur garnettii RBPs

137 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL012708 Aedes aegypti AAEL012708 I 0.000
Ame_R015561 Ailuropoda melanoleuca Ame_R015561 I 0.000
Ame_R004658 Ailuropoda melanoleuca Ame_R004658 I 0.769
Ame_R007174 Ailuropoda melanoleuca Ame_R007174 I 0.793
Aqu1.215178 Amphimedon queenslandica Aqu1.215178 I 0.000
MEX3C Anolis carolinensis ENSACAG00000010265 I 0.912
AGAP013259 Anopheles gambiae AGAP013259 I 0.000
amel4_ncbi_hmm6985 Apis mellifera amel4_ncbi_hmm6985 I 0.744
BGIBMGA012436 Bombyx mori BGIBMGA012436 I 0.843
MEX3B Bos taurus ENSBTAG00000016630 I 0.793
Q2YDI4_BOVIN Bos taurus ENSBTAG00000014886 I 0.912
MEX3A Bos taurus ENSBTAG00000019158 I 0.000
estExt_fgenesh2_pg.C_2010087 Branchiostoma floridae estExt_fgenesh2_pg.C_2010087 I 0.785
CBN24563 Caenorhabditis brenneri CBN24563 I 0.000
CBG05100 Caenorhabditis briggsae CBG05100 I 0.000
mex-3 Caenorhabditis elegans F53G12.5 I 0.000
CJA18034 Caenorhabditis japonica CJA18034 I 0.000
CRE03823 Caenorhabditis remanei CRE03823 I 0.000
MEX3B Callithrix jacchus ENSCJAG00000008043 I 0.793
LOC100410413 Callithrix jacchus ENSCJAG00000007711 I 0.000
LOC100410023 Callithrix jacchus ENSCJAG00000001902 I 0.769
MEX3C Canis familiaris ENSCAFG00000000162 I 0.775
MEX3A Cavia porcellus ENSCPOG00000020219 I 0.000
MEX3B Cavia porcellus ENSCPOG00000023663 I 0.713
ENSCPOG00000008241 Cavia porcellus ENSCPOG00000008241 I 0.787
MEX3C Cavia porcellus ENSCPOG00000009646 I 0.769
MEX3C Choloepus hoffmanni ENSCHOG00000004915 I 0.769
ENSCING00000002603 Ciona intestinalis ENSCING00000002603 I 0.760
CpipJ_CPIJ010634 Culex pipiens CpipJ_CPIJ010634 I 0.000
CPIJ010634 Culex quinquefasciatus CPIJ010634 I 0.000
MEX3B Danio rerio ENSDARG00000058369 I 0.785
MEX3A Danio rerio ENSDARG00000076638 I 0.000
e_gw1.15.409.1 Daphnia pulex e_gw1.15.409.1 I 0.727
MEX3B Dasypus novemcinctus ENSDNOG00000012736 I 0.790
MEX3C Dasypus novemcinctus ENSDNOG00000006544 I 0.769
Mex3c Dipodomys ordii ENSDORG00000007962 I 0.921
Mex3a Dipodomys ordii ENSDORG00000002921 I 0.000
GF20555 Drosophila ananassae FBgn0097561 I 0.000
GG16398 Drosophila erecta FBgn0108630 I 0.702
GH23938 Drosophila grimshawi FBgn0131395 I 0.702
CG11360 Drosophila melanogaster FBgn0039920 D 0.702
GL18139 Drosophila persimilis FBgn0155742 I 0.702
GA10947-RA Drosophila pseudoobscura FBgn0071003 I 0.702
GM26809 Drosophila sechellia FBgn0181661 I 0.702
GD24410 Drosophila simulans FBgn0195748 I 0.702
GJ18673 Drosophila virilis FBgn0205827 I 0.702
GK13594 Drosophila willistoni FBgn0215602 I 0.702
GE14558 Drosophila yakuba FBgn0232157 I 0.702
MEX3C Echinops telfairi ENSETEG00000003647 I 0.931
MEX3C Equus caballus ENSECAG00000021727 I 0.769
MEX3B Equus caballus ENSECAG00000013497 I 0.793
MEX3C Erinaceus europaeus ENSEEUG00000010864 I 0.921
MEX3D Gasterosteus aculeatus ENSGACG00000015299 I 0.713
MEX3B Gasterosteus aculeatus ENSGACG00000012530 I 0.752
MEX3C Gasterosteus aculeatus ENSGACG00000007490 I 0.760
MEX3C Gorilla gorilla ENSGGOG00000014875 I 0.769
MEX3B Gorilla gorilla ENSGGOG00000000597 I 0.793
MEX3D Gorilla gorilla ENSGGOG00000001083 I 0.713
MEX3A Gorilla gorilla ENSGGOG00000004513 I 0.000
MEX3D Homo sapiens ENSG00000181588 I 0.713
MEX3C Homo sapiens ENSG00000176624 I 0.769
MEX3B Homo sapiens ENSG00000183496 I 0.793
XP_002168292.1 Hydra magnipapillata XP_002168292.1 I 0.702
estExt_Genewise1.C_sca_540218 Lottia gigantea estExt_Genewise1.C_sca_540218 I 0.744
MEX3C Loxodonta africana ENSLAFG00000027818 I 0.769
MEX3B Loxodonta africana ENSLAFG00000006027 I 0.941
MEX3A Macaca mulatta ENSMMUG00000022307 I 0.000
MEX3B Macaca mulatta ENSMMUG00000018639 I 0.793
MEX3C Macaca mulatta ENSMMUG00000023652 I 0.769
MEX3C Macropus eugenii ENSMEUG00000015929 I 0.921
MEX3D Macropus eugenii ENSMEUG00000016404 I 0.730
MEX3B Macropus eugenii ENSMEUG00000002402 I 0.785
MEX3D Meleagris gallopavo ENSMGAG00000002325 I 0.902
MEX3C Microcebus murinus ENSMICG00000005815 I 0.921
MEX3A Microcebus murinus ENSMICG00000002233 I 0.000
MEX3A Monodelphis domestica ENSMODG00000016954 I 0.000
MEX3B Monodelphis domestica ENSMODG00000019387 I 0.941
MEX3D Monodelphis domestica ENSMODG00000004116 I 0.730
MEX3C Monodelphis domestica ENSMODG00000011001 I 0.769
Mex3d Mus musculus ENSMUSG00000048696 I 0.713
Mex3c Mus musculus ENSMUSG00000037253 I 0.769
MEX3C Myotis lucifugus ENSMLUG00000012585 I 0.921
nasonia_NCBI_hmm456104 Nasonia vitripennis nasonia_NCBI_hmm456104 I 0.744
gw.320.9.1 Nematostella vectensis gw.320.9.1 I 0.711
MEX3A Ochotona princeps ENSOPRG00000002937 I 0.000
MEX3B Ochotona princeps ENSOPRG00000009604 I 0.793
SNAPOd2T00016811001 Oikopleura dioica SNAPOd2T00016811001 I 0.000
MEX3D Ornithorhynchus anatinus ENSOANG00000011764 I 0.000
MEX3C Ornithorhynchus anatinus ENSOANG00000008116 I 0.912
ENSOCUG00000014295 Oryctolagus cuniculus ENSOCUG00000014295 I 0.750
ENSOCUG00000012549 Oryctolagus cuniculus ENSOCUG00000012549 I 0.769
MEX3A Oryctolagus cuniculus ENSOCUG00000005640 I 0.000
MEX3C Oryzias latipes ENSORLG00000004985 I 0.777
MEX3D Pan troglodytes ENSPTRG00000010208 I 0.713
MEX3C Pan troglodytes ENSPTRG00000010029 I 0.769
MEX3B Pan troglodytes ENSPTRG00000007373 I 0.793
ENSPPYG00000006723 Pongo pygmaeus ENSPPYG00000006723 I 0.793
ENSPPYG00000000729 Pongo pygmaeus ENSPPYG00000000729 I 0.000
ENSPPYG00000009324 Pongo pygmaeus ENSPPYG00000009324 I 0.713
Ppa-mex-3 Pristionchus pacificus PPA08528 N 0.709
MEX3C Procavia capensis ENSPCAG00000009258 I 0.777
MEX3A Pteropus vampyrus ENSPVAG00000010333 I 0.718
MEX3B Pteropus vampyrus ENSPVAG00000000093 I 0.793
MEX3C Pteropus vampyrus ENSPVAG00000015135 I 0.769
Mex3c Rattus norvegicus ENSRNOG00000015777 I 0.769
Mex3d Rattus norvegicus ENSRNOG00000030830 I 0.713
MEX3C Sorex araneus ENSSARG00000006940 I 0.921
XP_001175528.1 Strongylocentrotus purpuratus XP_001175528.1 I 0.727
XP_786425.2 Strongylocentrotus purpuratus XP_786425.2 I 0.727
MEX3D Taeniopygia guttata ENSTGUG00000000201 I 0.738
MEX3B Takifugu rubripes ENSTRUG00000000367 I 0.913
MEX3C Takifugu rubripes ENSTRUG00000011888 I 0.886
MEX3D Takifugu rubripes ENSTRUG00000007986 I 0.901
MEX3B Tetraodon nigroviridis ENSTNIG00000003398 I 0.777
MEX3D Tetraodon nigroviridis ENSTNIG00000015325 I 0.721
MEX3C Tupaia belangeri ENSTBEG00000014438 I 0.921
MEX3A Tursiops truncatus ENSTTRG00000013346 I 0.000
MEX3D Tursiops truncatus ENSTTRG00000008132 I 0.713
MEX3C Tursiops truncatus ENSTTRG00000004570 I 0.769
MEX3C Vicugna pacos ENSVPAG00000003137 I 0.921
AAI42552 Xenopus laevis AAI42552 I 0.713
AAI33220 Xenopus laevis AAI33220 I 0.705
AAI30196 Xenopus laevis AAI30196 I 0.702
AAI30114 Xenopus laevis AAI30114 I 0.705
AAI30070 Xenopus laevis AAI30070 I 0.785
AAI28670 Xenopus laevis AAI28670 I 0.783
A1L3F4 Xenopus laevis A1L3F4 I 0.785
BAH79688 Xenopus laevis BAH79688 I 0.785
mex3c Xenopus tropicalis ENSXETG00000022367 I 0.783