ENSPPYG00000013822 (Pongo pygmaeus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSPPYG00000013822 T19346_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.742
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.716
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.716
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.705
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.705
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000015469 KH 19 79
ENSPPYP00000015469 KH 103 166
ENSPPYP00000015469 KH 243 305

Links

Other KH family RBPs
Other Pongo pygmaeus RBPs

99 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R020987 Ailuropoda melanoleuca Ame_R020987 N 0.000
SRSF11 Anolis carolinensis ENSACAG00000013654 N 0.000
Q148M1_BOVIN Bos taurus ENSBTAG00000015474 N 0.000
ENSCJAG00000009424 Callithrix jacchus ENSCJAG00000009424 N 0.000
LOC100400412 Callithrix jacchus ENSCJAG00000017704 N 0.000
SRSF11 Cavia porcellus ENSCPOG00000009554 N 0.000
srsf11 Danio rerio ENSDARG00000004342 N 0.000
SREK1 Dasypus novemcinctus ENSDNOG00000010327 N 0.000
Srsf11 Dipodomys ordii ENSDORG00000000669 N 0.000
SRSF11 Erinaceus europaeus ENSEEUG00000002456 N 0.000
Q5ZJ42_CHICK Gallus gallus ENSGALG00000011305 N 0.000
SRSF11 Gasterosteus aculeatus ENSGACG00000009346 N 0.000
SRSF11 Gasterosteus aculeatus ENSGACG00000017855 N 0.000
SRSF11 Gorilla gorilla ENSGGOG00000005774 N 0.000
SRSF11 Homo sapiens ENSG00000116754 N 0.000
SRSF11 Loxodonta africana ENSLAFG00000015882 N 0.000
SFRS11 Macaca mulatta ENSMMUG00000013852 N 0.000
SRSF11 Macropus eugenii ENSMEUG00000000319 N 0.000
SRSF11 Microcebus murinus ENSMICG00000005537 N 0.000
SRSF11 Monodelphis domestica ENSMODG00000000559 N 0.000
Srsf11 Mus musculus ENSMUSG00000055436 N 0.000
SRSF11 Myotis lucifugus ENSMLUG00000006203 N 0.000
SRSF11 Ornithorhynchus anatinus ENSOANG00000015528 N 0.000
ENSOCUG00000024114 Oryctolagus cuniculus ENSOCUG00000024114 N 0.000
ENSOCUG00000002001 Oryctolagus cuniculus ENSOCUG00000002001 N 0.000
SRSF11 Oryzias latipes ENSORLG00000007753 N 0.000
SRSF11 Oryzias latipes ENSORLG00000017357 N 0.000
SRSF11 Pan troglodytes ENSPTRG00000000852 N 0.000
ENSPPYG00000001245 Pongo pygmaeus ENSPPYG00000001245 N 0.000
ENSPPYG00000015515 Pongo pygmaeus ENSPPYG00000015515 N 0.000
SRSF11 Procavia capensis ENSPCAG00000012684 N 0.000
SRSF11 Pteropus vampyrus ENSPVAG00000011918 N 0.000
D3ZDC8_RAT Rattus norvegicus ENSRNOG00000029592 N 0.000
SRSF11 Sorex araneus ENSSARG00000005811 N 0.000
SRSF11 Sus scrofa ENSSSCG00000003791 N 0.000
SRSF11 Takifugu rubripes ENSTRUG00000009316 N 0.000
SRSF11 Takifugu rubripes ENSTRUG00000017369 N 0.000
SRSF11 Tetraodon nigroviridis ENSTNIG00000008514 N 0.000
SRSF11 Tetraodon nigroviridis ENSTNIG00000010494 N 0.000
SRSF11 Tupaia belangeri ENSTBEG00000004406 N 0.000
SRSF11 Tursiops truncatus ENSTTRG00000015054 N 0.000
AAH72078 Xenopus laevis AAH72078 N 0.000
AAI10935 Xenopus laevis AAI10935 N 0.000
srsf11 Xenopus tropicalis ENSXETG00000012371 N 0.000