CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MGG_06296
(
Magnaporthe oryzae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MGG_06296
T29766_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGG_06296T0
RRM
50
120
LYVGNLSFYTTEEQVYELFSKCGEIKRLVMGLDRFNKTPCGFCFVEYYTHQDAIDCMKYIGGTKLDERVIR
Links
Other
RRM
family RBPs
Other
Magnaporthe oryzae
RBPs
109 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NCBP2_AEDAE
Aedes aegypti
AAEL006135
N
0.704
AMAG_02834
Allomyces macrogynus
AMAG_02834
N
0.718
Aqu1.228507
Amphimedon queenslandica
Aqu1.228507
N
0.704
ENSACAG00000015128
Anolis carolinensis
ENSACAG00000015128
N
0.718
amel4_ncbi_hmm3188
Apis mellifera
amel4_ncbi_hmm3188
N
0.746
ACLA_080400
Aspergillus clavatus
CADACLAG00007885
N
0.831
AFLA_046450
Aspergillus flavus
CADAFLAG00005972
N
0.887
AFUA_2G08570
Aspergillus fumigatus
CADAFUAG00004718
N
0.915
An12g03930
Aspergillus niger
CADANGAG00009835
N
0.901
e_gw1.18.125.1
Batrachochytrium dendrobatidis
e_gw1.18.125.1
N
0.775
BDBG_08091
Blastomyces dermatitidis
BDBG_08091
N
0.915
BGIBMGA007585
Bombyx mori
BGIBMGA007585
N
0.704
BC1G_04395
Botrytis cinerea
BC1G_04395
N
0.915
gw.81.90.1
Branchiostoma floridae
gw.81.90.1
N
0.732
gw.93.114.1
Branchiostoma floridae
gw.93.114.1
N
0.732
CHGG_03355
Chaetomium globosum
CHGG_03355
N
0.875
CIMG_00837
Coccidioides immitis
CIMG_00837
N
0.915
CPSG_08054
Coccidioides posadasii
CPSG_08054
N
0.915
estExt_Genewise1.C_10147
Cochliobolus heterostrophus C5
estExt_Genewise1.C_10147
N
0.944
GLRG_00177
Colletotrichum graminicola
GLRG_00177
N
0.986
fgenesh1_pg.C_scaffold_1000747
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_1000747
N
0.915
ncbp2
Dictyostelium discoideum
DDB_G0287197
N
0.789
GID1.0044779
Dictyostelium purpureum
GID1.0044779
N
0.789
FGSG_05488
Fusarium graminearum
FGSG_05488
N
0.930
FOXG_09405
Fusarium oxysporum
FOXG_09405
N
0.847
FVEG_07036
Fusarium verticillioides
FVEG_07036
N
0.915
NCBP2_CHICK
Gallus gallus
ENSGALG00000005753
N
0.718
NCBP2
Gallus gallus
ENSGALG00000006843
N
0.000
HCAG_07341
Histoplasma capsulatum
HCAG_07341
N
0.915
NCBP2_IXOSC
Ixodes scapularis
ISCW017479
N
0.732
estExt_Genewise1_worm.C_60324
Laccaria bicolor
estExt_Genewise1_worm.C_60324
N
0.000
e_gw1.40.70.1
Melampsora laricis populina
e_gw1.40.70.1
N
0.704
ENSMGAG00000002257
Meleagris gallopavo
ENSMGAG00000002257
N
0.718
ENSMGAG00000006728
Meleagris gallopavo
ENSMGAG00000006728
N
0.000
MCYG_04468
Microsporum canis
MCYG_04468
N
0.915
MGYG_02166
Microsporum gypseum
MGYG_02166
N
0.915
XM_001373408.1
Monodelphis domestica
ENSMODG00000015908
N
0.704
fgeneshMC_pm.5_#_40
Mucor circinelloides
fgeneshMC_pm.5_#_40
N
0.817
estExt_Genewise1Plus.C_40730
Myceliophthora thermophila
estExt_Genewise1Plus.C_40730
N
0.972
nasonia_NCBI_hmm1532803
Nasonia vitripennis
nasonia_NCBI_hmm1532803
N
0.746
nasonia_NCBI_hmm134534
Nasonia vitripennis
nasonia_NCBI_hmm134534
N
0.746
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014
Nectria haematococca
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014
N
0.944
NFIA_084190
Neosartorya fischeri
CADNFIAG00008064
N
0.915
NCU00210
Neurospora crassa
NCU00210
N
0.944
estExt_Genewise1Plus.C_50921
Neurospora discreta
estExt_Genewise1Plus.C_50921
N
0.944
PABG_07236
Paracoccidioides brasiliensis
PABG_07236
N
0.915
PHUM535920
Pediculus humanus
PHUM535920
N
0.761
Pc13g04070
Penicillium chrysogenum
Pc13g04070
N
0.915
PMAA_070830
Penicillium marneffei
PMAA_070830
N
0.901
EAT82863.2
Phaeosphaeria nodorum
EAT82863.2
N
0.944
gwh2.1.1054.1
Phanerochaete chrysosporium
gwh2.1.1054.1
N
0.000
gw1.29.143.1
Phycomyces blakesleeanus
gw1.29.143.1
N
0.831
PredSwiss_ASS2010_2397.2
Pneumocystis carinii
PredSwiss_ASS2010_2397.2
N
0.773
PredSwiss_CON682.3
Pneumocystis carinii
PredSwiss_CON682.3
N
0.773
Pa_7_2520
Podospora anserina
Pa_7_2520
N
0.958
EFA74823.1
Polysphondylium pallidum
EFA74823.1
N
0.789
e_gw1.121.83.1
Postia placenta
e_gw1.121.83.1
N
0.000
PGTG_01720
Puccinia graminis
PGTG_01720
N
0.732
PTRG_00402
Pyrenophora tritici repentis
PTRG_00402
N
0.944
estExt_fgenesh1_pm.C_20437
Schizophyllum commune
estExt_fgenesh1_pm.C_20437
N
0.727
SPOG_01217
Schizosaccharomyces cryophilus
SPOG_01217
N
0.775
SJAG_01064
Schizosaccharomyces japonicus
SJAG_01064
N
0.775
SOCG_01831
Schizosaccharomyces octosporus
SOCG_01831
N
0.761
cbc2
Schizosaccharomyces pombe
SPBC13A2.01c
N
0.746
SS1G_13629
Sclerotinia sclerotiorum
SS1G_13629
N
0.915
e_gw1.80.70.1
Selaginella moellendorfii
e_gw1.80.70.1
N
0.746
estExt_fgenesh2_kg.C_120041
Serpula lacrymans
estExt_fgenesh2_kg.C_120041
N
0.000
SPPG_00516
Spizellomyces punctatus
SPPG_00516
N
0.845
gw1.1.1171.1
Sporobolomyces roseus
gw1.1.1171.1
N
0.704
SNOG_09598
Stagonospora nodorum
SNOG_09598
N
0.944
B5G279_TAEGU
Taeniopygia guttata
ENSTGUG00000007323
N
0.732
NCBP2
Taeniopygia guttata
ENSTGUG00000008864
N
0.000
e_gw1.3.1174.1
Thielavia terrestris
e_gw1.3.1174.1
N
0.972
estExt_Genewise1Plus.C_150343
Trichoderma atroviride
estExt_Genewise1Plus.C_150343
N
0.958
e_gw1.17.191.1
Trichoderma reesei
e_gw1.17.191.1
N
0.944
e_gw1.10.746.1
Trichoderma virens
e_gw1.10.746.1
N
0.958
TEQG_01953
Trichophyton equinum
TEQG_01953
N
0.915
TERG_03424
Trichophyton rubrum
TERG_03424
N
0.915
TESG_01120
Trichophyton tonsurans
TESG_01120
N
0.901
GSTUMT00010626001
Tuber melanosporum
GSTUMT00010626001
N
0.887
VDBG_06810
Verticillium albo atrum
VDBG_06810
N
0.958
VDAG_05874
Verticillium dahliae
VDAG_05874
N
0.958
NCBP2
Vicugna pacos
ENSVPAG00000010369
N
0.000
2118330B
Xenopus laevis
2118330B
N
0.000
AAH72902
Xenopus laevis
AAH72902
N
0.000
CAA59259
Xenopus laevis
CAA59259
N
0.000
P52299
Xenopus laevis
P52299
N
0.000
ncbp2
Xenopus tropicalis
ENSXETG00000019384
N
0.000