CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPM
(
Microcebus murinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMICG00000002532
T38475_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMICP00000002312
RRM
35
105
AFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLK
ENSMICP00000002312
RRM
171
237
XXLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMH
ENSMICP00000002312
RRM
617
685
IFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMNGMKLSGREID
Links
Other
RRM
family RBPs
Other
Microcebus murinus
RBPs
72 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R005511
Ailuropoda melanoleuca
Ame_R005511
N
0.754
Ame_R017061
Ailuropoda melanoleuca
Ame_R017061
N
0.976
MYEF2
Anolis carolinensis
ENSACAG00000004806
N
0.739
A6QQP0_BOVIN
Bos taurus
ENSBTAG00000008771
N
0.754
Q3SYX2_BOVIN
Bos taurus
ENSBTAG00000021039
N
0.976
MYEF2
Callithrix jacchus
ENSCJAG00000001875
N
0.749
HNRNPM
Callithrix jacchus
ENSCJAG00000010802
N
0.971
MYEF2
Canis familiaris
ENSCAFG00000014008
N
0.754
HNRNPM
Canis familiaris
ENSCAFG00000018524
N
0.976
HNRNPM
Cavia porcellus
ENSCPOG00000015182
N
0.971
MYEF2
Cavia porcellus
ENSCPOG00000010584
N
0.708
HNRNPM
Choloepus hoffmanni
ENSCHOG00000013627
N
0.976
myef2
Danio rerio
ENSDARG00000059398
N
0.701
HNRNPM
Dasypus novemcinctus
ENSDNOG00000012157
N
0.905
ENSDORG00000015835
Dipodomys ordii
ENSDORG00000015835
N
0.749
HNRNPM
Echinops telfairi
ENSETEG00000019712
N
0.976
HNRNPM
Equus caballus
ENSECAG00000023868
N
0.976
LOC100070256
Equus caballus
ENSECAG00000005741
N
0.754
HNRNPM
Felis catus
ENSFCAG00000015218
N
0.872
Q5ZHY2_CHICK
Gallus gallus
ENSGALG00000004905
N
0.754
Q5ZL80_CHICK
Gallus gallus
ENSGALG00000000377
N
0.934
MYEF2
Gasterosteus aculeatus
ENSGACG00000016759
N
0.711
HNRNPM
Gasterosteus aculeatus
ENSGACG00000010265
N
0.791
HNRNPM
Gorilla gorilla
ENSGGOG00000003498
N
0.976
MYEF2
Gorilla gorilla
ENSGGOG00000014968
N
0.749
HNRNPM
Homo sapiens
ENSG00000099783
N
0.976
MYEF2
Homo sapiens
ENSG00000104177
N
0.754
HNRNPM
Loxodonta africana
ENSLAFG00000013603
N
0.976
MYEF2
Loxodonta africana
ENSLAFG00000012990
N
0.758
HNRNPM
Macaca mulatta
ENSMMUG00000018806
N
0.976
MYEF2
Macaca mulatta
ENSMMUG00000018834
N
0.754
HNRNPM
Macropus eugenii
ENSMEUG00000004789
N
0.896
MYEF2
Meleagris gallopavo
ENSMGAG00000006915
N
0.754
HNRNPM
Meleagris gallopavo
ENSMGAG00000000700
N
0.920
ENSMODG00000003473
Monodelphis domestica
ENSMODG00000003473
N
0.703
XM_001365870.1
Monodelphis domestica
ENSMODG00000003801
N
0.967
Hnrnpm
Mus musculus
ENSMUSG00000059208
N
0.971
Myef2
Mus musculus
ENSMUSG00000027201
N
0.754
HNRNPM
Myotis lucifugus
ENSMLUG00000006696
N
0.971
HNRNPM
Ochotona princeps
ENSOPRG00000001943
N
0.919
ENSOCUG00000000552
Oryctolagus cuniculus
ENSOCUG00000000552
N
0.976
MYEF2
Oryctolagus cuniculus
ENSOCUG00000013043
N
0.754
ENSOCUG00000024611
Oryctolagus cuniculus
ENSOCUG00000024611
N
0.976
MYEF2
Oryzias latipes
ENSORLG00000002730
N
0.701
HNRNPM
Oryzias latipes
ENSORLG00000005400
N
0.782
MYEF2
Otolemur garnettii
ENSOGAG00000010907
N
0.731
HNRNPM
Otolemur garnettii
ENSOGAG00000003234
N
0.862
HNRNPM
Pan troglodytes
ENSPTRG00000010424
N
0.976
MYEF2
Pan troglodytes
ENSPTRG00000007042
N
0.754
ENSPPYG00000009506
Pongo pygmaeus
ENSPPYG00000009506
N
0.976
ENSPPYG00000006452
Pongo pygmaeus
ENSPPYG00000006452
N
0.754
HNRNPM
Procavia capensis
ENSPCAG00000009678
N
0.957
MYEF2
Procavia capensis
ENSPCAG00000016660
N
0.754
Myef2
Rattus norvegicus
ENSRNOG00000005258
N
0.758
Hnrpm
Rattus norvegicus
ENSRNOG00000007921
N
0.976
ENSRNOG00000024645
Rattus norvegicus
ENSRNOG00000024645
N
0.870
HNRNPM
Sorex araneus
ENSSARG00000000267
N
0.943
HNRNPM
Spermophilus tridecemlineatus
ENSSTOG00000008112
N
0.952
HNRNPM
Sus scrofa
ENSSSCG00000013602
N
0.976
MYEF2
Sus scrofa
ENSSSCG00000004661
N
0.744
MYEF2
Taeniopygia guttata
ENSTGUG00000007130
N
0.749
HNRNPM
Takifugu rubripes
ENSTRUG00000013783
N
0.763
MYEF2
Tetraodon nigroviridis
ENSTNIG00000009526
N
0.712
HNRNPM
Tetraodon nigroviridis
ENSTNIG00000015530
N
0.754
HNRNPM
Tupaia belangeri
ENSTBEG00000008718
N
0.957
HNRNPM
Tursiops truncatus
ENSTTRG00000009769
N
0.976
MYEF2
Tursiops truncatus
ENSTTRG00000008076
N
0.754
MYEF2
Vicugna pacos
ENSVPAG00000004721
N
0.754
AAI08588
Xenopus laevis
AAI08588
N
0.716
AAI34826
Xenopus laevis
AAI34826
N
0.838
hnrnpm
Xenopus tropicalis
ENSXETG00000001777
N
0.781
myef2
Xenopus tropicalis
ENSXETG00000018412
N
0.720