gw1.41.247.1 (Selaginella moellendorfii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw1.41.247.1 T53260_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
AT1G76460-TAIR-G
M239_0.6 		Arabidopsis thaliana DGWGUGD RNAcompete
Ray et al.(2013)
RNCMPT00284 		0.824
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.41.247.1 RRM 8 75

Links

Other RRM family RBPs
Other Selaginella moellendorfii RBPs

97 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002883853.1 Arabidopsis lyrata scaffold_303734.1 N 0.000
PK02172.1 Cannabis sativa PK02172.1 N 0.000
Cucsa.244510 Cucumis sativus Cucsa.244510 N 0.000
Cucsa.219740 Cucumis sativus Cucsa.219740 N 0.000
Glyma07g33860.1 Glycine max Glyma07g33860.1 N 0.000
Glyma02g11580.1 Glycine max Glyma02g11580.1 N 0.000
MDP0000156895 Malus x domestica MDP0000156895 N 0.000
MDP0000253709 Malus x domestica MDP0000253709 N 0.000
MDP0000497543 Malus x domestica MDP0000497543 N 0.000
cassava17495.valid.m1 Manihot esculenta cassava17495.valid.m1 N 0.000
cassava12359.valid.m1 Manihot esculenta cassava12359.valid.m1 N 0.000
cassava6947.valid.m1 Manihot esculenta cassava6947.valid.m1 N 0.000
Medtr3g147440 Medicago truncatula Medtr3g147440 N 0.000
Medtr4g130250 Medicago truncatula Medtr4g130250 N 0.000
mgf009542m Mimulus guttatus mgf009542m N 0.000
mgf004973m Mimulus guttatus mgf004973m N 0.000
BGIOSIBCE029001 Oryza indica BGIOSIBCE029001 N 0.000
BGIOSIBCE027387 Oryza indica BGIOSIBCE027387 N 0.000
LOC_Os08g22354 Oryza sativa LOC_Os08g22354 N 0.000
LOC_Os09g02700 Oryza sativa LOC_Os09g02700 N 0.000
e_gw1.51.213.1 Physcomitrella patens e_gw1.51.213.1 N 0.000
estExt_Genewise1.C_1260120 Physcomitrella patens estExt_Genewise1.C_1260120 N 0.000
estExt_fgenesh1_pm.C_2810008 Physcomitrella patens estExt_fgenesh1_pm.C_2810008 N 0.000
estExt_fgenesh1_pg.C_2570045 Physcomitrella patens estExt_fgenesh1_pg.C_2570045 N 0.000
A9PEX9_POPTR Populus trichocarpa POPTR_0001s31160 N 0.000
POPTR_0002s12570 Populus trichocarpa POPTR_0002s12570 N 0.000
B9HS30_POPTR Populus trichocarpa POPTR_0009s10220 N 0.000
B9GNU4_POPTR Populus trichocarpa POPTR_0014s02550 N 0.000
ppa002607m Prunus persica ppa002607m N 0.000
30170.m013847 Ricinus communis 30170.m013847 N 0.000
29801.m003152 Ricinus communis 29801.m003152 N 0.000
gw1.0.426.1 Selaginella moellendorfii gw1.0.426.1 N 0.000
Sb02g017910 Sorghum bicolor Sb02g017910 N 0.000
GSVIVG00009455001 Vitis vinifera GSVIVG00009455001 N 0.000
GSVIVG00022079001 Vitis vinifera GSVIVG00022079001 N 0.000
GRMZM2G102829 Zea mays GRMZM2G102829 N 0.000