e_gw1.51.213.1 (Physcomitrella patens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.51.213.1 T50040_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.51.213.1 RRM 26 96
e_gw1.51.213.1 RRM 114 183
e_gw1.51.213.1 RRM 205 274
e_gw1.51.213.1 RRM 308 377

Links

Other RRM family RBPs
Other Physcomitrella patens RBPs

55 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1.C_1260120 Physcomitrella patens estExt_Genewise1.C_1260120 N 0.918
estExt_fgenesh1_pm.C_2810008 Physcomitrella patens estExt_fgenesh1_pm.C_2810008 N 0.883
estExt_fgenesh1_pg.C_2570045 Physcomitrella patens estExt_fgenesh1_pg.C_2570045 N 0.883
gw1.0.426.1 Selaginella moellendorfii gw1.0.426.1 N 0.794
e_gw1.24.89.1 Selaginella moellendorfii e_gw1.24.89.1 N 0.776
Glyma02g11580.1 Glycine max Glyma02g11580.1 N 0.762
GSVIVG00009455001 Vitis vinifera GSVIVG00009455001 N 0.762
Medtr4g130250 Medicago truncatula Medtr4g130250 N 0.758
cassava6947.valid.m1 Manihot esculenta cassava6947.valid.m1 N 0.754
Glyma14g09300.1 Glycine max Glyma14g09300.1 N 0.754
POPTR_0002s12570 Populus trichocarpa POPTR_0002s12570 N 0.754
Glyma07g33860.1 Glycine max Glyma07g33860.1 N 0.754
B9HS30_POPTR Populus trichocarpa POPTR_0009s10220 N 0.751
B9GNU4_POPTR Populus trichocarpa POPTR_0014s02550 N 0.751
MDP0000253709 Malus x domestica MDP0000253709 N 0.747
MDP0000156895 Malus x domestica MDP0000156895 N 0.747
mgf009542m Mimulus guttatus mgf009542m N 0.747
Sb02g017910 Sorghum bicolor Sb02g017910 N 0.747
GSVIVG00022079001 Vitis vinifera GSVIVG00022079001 N 0.744
LOC_Os09g02700 Oryza sativa LOC_Os09g02700 N 0.744
ppa002607m Prunus persica ppa002607m N 0.744
A9PEX9_POPTR Populus trichocarpa POPTR_0001s31160 N 0.744
GRMZM2G102829 Zea mays GRMZM2G102829 N 0.744
Glyma17g35890.1 Glycine max Glyma17g35890.1 N 0.744
cassava12359.valid.m1 Manihot esculenta cassava12359.valid.m1 N 0.744
BGIOSIBCE029001 Oryza indica BGIOSIBCE029001 N 0.744
29801.m003152 Ricinus communis 29801.m003152 N 0.744
mgf004973m Mimulus guttatus mgf004973m N 0.740
MDP0000497543 Malus x domestica MDP0000497543 N 0.740
ppa002620m Prunus persica ppa002620m N 0.737
ppa002618m Prunus persica ppa002618m N 0.737
BGIOSIBCE027387 Oryza indica BGIOSIBCE027387 N 0.734
LOC_Os08g22354 Oryza sativa LOC_Os08g22354 N 0.734
30170.m013847 Ricinus communis 30170.m013847 N 0.733
Medtr1g024150 Medicago truncatula Medtr1g024150 N 0.733
PK02172.1 Cannabis sativa PK02172.1 N 0.733
cassava17495.valid.m1 Manihot esculenta cassava17495.valid.m1 N 0.733
Cucsa.219740 Cucumis sativus Cucsa.219740 N 0.730
Cucsa.244510 Cucumis sativus Cucsa.244510 N 0.730
BRADI3G20460 Brachypodium distachyon BRADI3G20460 N 0.723
BRADI4G08430 Brachypodium distachyon BRADI4G08430 N 0.722
XM_002883853.1 Arabidopsis lyrata scaffold_303734.1 N 0.719
MDP0000283985 Malus x domestica MDP0000283985 N 0.719
PK00659.1 Cannabis sativa PK00659.1 N 0.715
Medtr3g147440 Medicago truncatula Medtr3g147440 N 0.715
XM_002878634.1 Arabidopsis lyrata scaffold_400317.1 N 0.715
PAB4 Arabidopsis thaliana AT2G23350-TAIR-G N 0.712
Glyma04g04300.1 Glycine max Glyma04g04300.1 N 0.712
Glyma06g04460.1 Glycine max Glyma06g04460.1 N 0.708
Cucsa.364050 Cucumis sativus Cucsa.364050 N 0.705
XM_002869128.1 Arabidopsis lyrata Al_scaffold_0007_654 N 0.705
estExt_fgenesh1_pg.C_10300 Micromonas pusilla estExt_fgenesh1_pg.C_10300 N 0.702
mgf005294m Mimulus guttatus mgf005294m N 0.701
PAB8 Arabidopsis thaliana AT1G49760-TAIR-G N 0.701
XM_002891485.1 Arabidopsis lyrata scaffold_104684.1 N 0.701