gw1.41.247.1 (Selaginella moellendorfii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw1.41.247.1 T53260_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
AT1G76460-TAIR-G
M239_0.6 		Arabidopsis thaliana DGWGUGD RNAcompete
Ray et al.(2013)
RNCMPT00284 		0.824
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.41.247.1 RRM 8 75

Links

Other RRM family RBPs
Other Selaginella moellendorfii RBPs

97 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma07g05670.1 Glycine max Glyma07g05670.1 I 0.941
Glyma16g02220.1 Glycine max Glyma16g02220.1 I 0.941
A9PAJ1_POPTR Populus trichocarpa POPTR_0014s10090 I 0.926
30076.m004440 Ricinus communis 30076.m004440 I 0.926
LjSGA_018073.2 Lotus japonicus LjSGA_018073.2 I 0.912
MDP0000744398 Malus x domestica MDP0000744398 I 0.912
MDP0000548950 Malus x domestica MDP0000548950 I 0.912
MDP0000488395 Malus x domestica MDP0000488395 I 0.912
cassava39418.m1 Manihot esculenta cassava39418.m1 I 0.912
B9GRQ8_POPTR Populus trichocarpa POPTR_0002s17990 I 0.912
cassava32990.m1 Manihot esculenta cassava32990.m1 I 0.897
GSVIVG00027434001 Vitis vinifera GSVIVG00027434001 I 0.897
Cucsa.348630 Cucumis sativus Cucsa.348630 I 0.897
ppa016222m Prunus persica ppa016222m I 0.897
PK14266.1 Cannabis sativa PK14266.1 I 0.897
Cucsa.005270 Cucumis sativus Cucsa.005270 I 0.882
Glyma16g02120.1 Glycine max Glyma16g02120.1 I 0.870
mgf017214m Mimulus guttatus mgf017214m I 0.868
ppa018603m Prunus persica ppa018603m I 0.855
AT2G46780 Arabidopsis thaliana AT2G46780-TAIR-G I 0.855
Glyma07g05590.1 Glycine max Glyma07g05590.1 I 0.855
Glyma06g01670.1 Glycine max Glyma06g01670.1 I 0.853
MDP0000857317 Malus x domestica MDP0000857317 I 0.841
XM_002880217.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4002831 I 0.841
MDP0000118777 Malus x domestica MDP0000118777 I 0.841
Medtr3g159840 Medicago truncatula Medtr3g159840 I 0.838
MDP0000134468 Malus x domestica MDP0000134468 I 0.838
gw1.51.103.1 Physcomitrella patens gw1.51.103.1 I 0.838
gw1.126.80.1 Physcomitrella patens gw1.126.80.1 I 0.838
B9GPN6_POPTR Populus trichocarpa POPTR_0002s00610 I 0.838
PK21213.1 Cannabis sativa PK21213.1 I 0.838
Glyma04g01590.1 Glycine max Glyma04g01590.1 I 0.838
Medtr5g073010 Medicago truncatula Medtr5g073010 I 0.824
GSVIVG00009045001 Vitis vinifera GSVIVG00009045001 I 0.824
cassava44391.m1 Manihot esculenta cassava44391.m1 I 0.824
CU179634_3 Medicago truncatula CU179634_3 I 0.824
ppa009964m Prunus persica ppa009964m I 0.824
B9H5W4_POPTR Populus trichocarpa POPTR_0005s27810 I 0.824
ppa009716m Prunus persica ppa009716m I 0.824
XM_002889039.1 Arabidopsis lyrata fgenesh2_kg.2__1933__AT1G76460.1 I 0.824
cassava7423.valid.m1 Manihot esculenta cassava7423.valid.m1 I 0.824
AT1G76460-TAIR-G Arabidopsis thaliana AT1G76460-TAIR-G D 0.824
MDP0000138486 Malus x domestica MDP0000138486 I 0.824
PK15672.1 Cannabis sativa PK15672.1 I 0.812
29908.m006046 Ricinus communis 29908.m006046 I 0.809
Glyma04g40770.1 Glycine max Glyma04g40770.1 I 0.809
Glyma13g01740.1 Glycine max Glyma13g01740.1 I 0.809
ppa018926m Prunus persica ppa018926m I 0.797
B9GUX4_POPTR Populus trichocarpa POPTR_0002s09830 I 0.797
ppa019392m Prunus persica ppa019392m I 0.797
Glyma14g35110.1 Glycine max Glyma14g35110.1 I 0.794
Glyma06g14020.1 Glycine max Glyma06g14020.1 N 0.794
MDP0000233609 Malus x domestica MDP0000233609 I 0.794
cassava39454.m1 Manihot esculenta cassava39454.m1 I 0.794
Cucsa.311530 Cucumis sativus Cucsa.311530 I 0.783
PK17691.1 Cannabis sativa PK17691.1 N 0.779
Medtr3g122940 Medicago truncatula Medtr3g122940 N 0.768
Glyma04g10900.1 Glycine max Glyma04g10900.1 I 0.768
e_gw1.23.82.1 Selaginella moellendorfii e_gw1.23.82.1 I 0.765
A9PDC5_POPTR Populus trichocarpa POPTR_0015s00790 N 0.765
GSVIVG00013430001 Vitis vinifera GSVIVG00013430001 I 0.765
MDP0000184420 Malus x domestica MDP0000184420 I 0.765
chr1.CM0150.310.nc Lotus japonicus chr1.CM0150.310.nc I 0.765
MDP0000284454 Malus x domestica MDP0000284454 I 0.765
Glyma06g10750.1 Glycine max Glyma06g10750.1 I 0.754
LOC_Os02g48340 Oryza sativa LOC_Os02g48340 I 0.750
BGIOSIBCE008410 Oryza indica BGIOSIBCE008410 I 0.750
AT1G78260 Arabidopsis thaliana AT1G78260-TAIR-G N 0.739
Cucsa.160090 Cucumis sativus Cucsa.160090 I 0.739
cassava23406.valid.m1 Manihot esculenta cassava23406.valid.m1 I 0.739
cassava23405.valid.m1 Manihot esculenta cassava23405.valid.m1 I 0.739
30170.m013735 Ricinus communis 30170.m013735 I 0.735
LOC_Os03g14190 Oryza sativa LOC_Os03g14190 I 0.735
XM_002890498.1 Arabidopsis lyrata scaffold_102598.1 I 0.735
AT1G22330 Arabidopsis thaliana AT1G22330-TAIR-G N 0.725
XM_002887685.1 Arabidopsis lyrata fgenesh2_kg.2__2123__AT1G78260.1 N 0.725
BRADI3G53240 Brachypodium distachyon BRADI3G53240 I 0.721
PDK_20s1420851g001 Phoenix dactylifera PDK_20s1420851g001 I 0.721
AT1G20880 Arabidopsis thaliana AT1G20880-TAIR-G I 0.721
BGIOSIBCE004465 Oryza indica BGIOSIBCE004465 I 0.721
cassava6633.valid.m1 Manihot esculenta cassava6633.valid.m1 I 0.721
29983.m003293 Ricinus communis 29983.m003293 I 0.721
GRMZM2G019266 Zea mays GRMZM2G019266 I 0.721
SB04G030020 Sorghum bicolor Sb04g030020 I 0.721
GRMZM2G042195 Zea mays GRMZM2G042195 I 0.721
LOC_Os01g65550 Oryza sativa LOC_Os01g65550 I 0.721
GRMZM2G123796 Zea mays GRMZM2G123796 I 0.721
cassava6634.valid.m1 Manihot esculenta cassava6634.valid.m1 I 0.721
SB03G041530 Sorghum bicolor Sb03g041530 I 0.721
XM_002890463.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001899 N 0.710
GRMZM2G005236 Zea mays GRMZM2G005236 I 0.706
BRADI3G58710 Brachypodium distachyon BRADI3G58710 I 0.706
A9P7Z9_POPTR Populus trichocarpa POPTR_0010s22380 I 0.706
29923.m000811 Ricinus communis 29923.m000811 I 0.706
LOC_Os03g17760 Oryza sativa LOC_Os03g17760 I 0.706
Cucsa.165980 Cucumis sativus Cucsa.165980 I 0.706
BRADI2G56676 Brachypodium distachyon BRADI2G56676 I 0.706