gw1.0.426.1 (Selaginella moellendorfii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw1.0.426.1 T53035_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.0.426.1 RRM 6 76
gw1.0.426.1 RRM 94 163
gw1.0.426.1 RRM 182 251
gw1.0.426.1 RRM 285 354

Links

Other RRM family RBPs
Other Selaginella moellendorfii RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.51.213.1 Physcomitrella patens e_gw1.51.213.1 N 0.794
estExt_fgenesh1_pg.C_2570045 Physcomitrella patens estExt_fgenesh1_pg.C_2570045 N 0.794
estExt_fgenesh1_pm.C_2810008 Physcomitrella patens estExt_fgenesh1_pm.C_2810008 N 0.786
estExt_Genewise1.C_1260120 Physcomitrella patens estExt_Genewise1.C_1260120 N 0.776
Glyma07g33860.1 Glycine max Glyma07g33860.1 N 0.754
Glyma02g11580.1 Glycine max Glyma02g11580.1 N 0.754
e_gw1.24.89.1 Selaginella moellendorfii e_gw1.24.89.1 N 0.751
Medtr4g130250 Medicago truncatula Medtr4g130250 N 0.747
B9GNU4_POPTR Populus trichocarpa POPTR_0014s02550 N 0.747
ppa002607m Prunus persica ppa002607m N 0.744
POPTR_0002s12570 Populus trichocarpa POPTR_0002s12570 N 0.740
30170.m013847 Ricinus communis 30170.m013847 N 0.740
mgf009542m Mimulus guttatus mgf009542m N 0.737
cassava6947.valid.m1 Manihot esculenta cassava6947.valid.m1 N 0.737
GSVIVG00009455001 Vitis vinifera GSVIVG00009455001 N 0.733
mgf004973m Mimulus guttatus mgf004973m N 0.733
Glyma17g35890.1 Glycine max Glyma17g35890.1 N 0.733
MDP0000156895 Malus x domestica MDP0000156895 N 0.733
MDP0000253709 Malus x domestica MDP0000253709 N 0.733
PK02172.1 Cannabis sativa PK02172.1 N 0.730
Glyma14g09300.1 Glycine max Glyma14g09300.1 N 0.730
cassava17495.valid.m1 Manihot esculenta cassava17495.valid.m1 N 0.730
MDP0000497543 Malus x domestica MDP0000497543 N 0.726
cassava12359.valid.m1 Manihot esculenta cassava12359.valid.m1 N 0.726
Medtr1g024150 Medicago truncatula Medtr1g024150 N 0.726
ppa002618m Prunus persica ppa002618m N 0.722
ppa002620m Prunus persica ppa002620m N 0.722
A9PEX9_POPTR Populus trichocarpa POPTR_0001s31160 N 0.722
B9HS30_POPTR Populus trichocarpa POPTR_0009s10220 N 0.719
LOC_Os08g22354 Oryza sativa LOC_Os08g22354 N 0.716
BGIOSIBCE027387 Oryza indica BGIOSIBCE027387 N 0.716
29801.m003152 Ricinus communis 29801.m003152 N 0.712
Cucsa.244510 Cucumis sativus Cucsa.244510 N 0.712
Cucsa.219740 Cucumis sativus Cucsa.219740 N 0.712
LOC_Os09g02700 Oryza sativa LOC_Os09g02700 N 0.708
GRMZM2G102829 Zea mays GRMZM2G102829 N 0.708
Sb02g017910 Sorghum bicolor Sb02g017910 N 0.708
BGIOSIBCE029001 Oryza indica BGIOSIBCE029001 N 0.708
BRADI4G08430 Brachypodium distachyon BRADI4G08430 N 0.708
GSVIVG00022079001 Vitis vinifera GSVIVG00022079001 N 0.708
MDP0000283985 Malus x domestica MDP0000283985 N 0.705
Medtr3g147440 Medicago truncatula Medtr3g147440 N 0.705