GRMZM2G132749 (Zea mays)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		GRMZM2G132749 T01010_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G132749_P01 CCCH ZF 150 172
GRMZM2G132749_P01 RRM 289 344
GRMZM2G132749_P02 CCCH ZF 150 172
GRMZM2G132749_P02 RRM 289 344
GRMZM2G132749_P03 CCCH ZF 150 172
GRMZM2G132749_P03 RRM 289 344

Links

Other CCCH ZF,RRM family RBPs
Other Zea mays RBPs

58 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SB08G001980 Sorghum bicolor Sb08g001980 N 0.880
GRMZM2G044004 Zea mays GRMZM2G044004 N 0.867
GRMZM2G346113 Zea mays GRMZM2G346113 N 0.819
SB05G001540 Sorghum bicolor Sb05g001540 N 0.807
cassava7294.valid.m1 Manihot esculenta cassava7294.valid.m1 N 0.795
cassava7293.valid.m1 Manihot esculenta cassava7293.valid.m1 N 0.795
cassava9561.m1 Manihot esculenta cassava9561.m1 N 0.795
cassava7292.valid.m1 Manihot esculenta cassava7292.valid.m1 N 0.795
B9GWA9_POPTR Populus trichocarpa POPTR_0003s20310 N 0.795
Cucsa.166080 Cucumis sativus Cucsa.166080 N 0.795
B9GI27_POPTR Populus trichocarpa POPTR_0001s26250 N 0.795
cassava30652.valid.m1 Manihot esculenta cassava30652.valid.m1 N 0.786
cassava30651.valid.m1 Manihot esculenta cassava30651.valid.m1 N 0.786
MDP0000120462 Malus x domestica MDP0000120462 N 0.786
BRADI4G44040 Brachypodium distachyon BRADI4G44040 N 0.783
POPTR_0001s05760 Populus trichocarpa POPTR_0001s05760 N 0.783
MDP0000120231 Malus x domestica MDP0000120231 N 0.774
30169.m006471 Ricinus communis 30169.m006471 N 0.774
LjT28K11.10.nd Lotus japonicus LjT28K11.10.nd N 0.771
Glyma09g35980.1 Glycine max Glyma09g35980.1 N 0.771
Glyma09g35990.1 Glycine max Glyma09g35990.1 N 0.771
Glyma12g01340.1 Glycine max Glyma12g01340.1 N 0.771
ppa023263m Prunus persica ppa023263m N 0.771
Glyma12g01350.1 Glycine max Glyma12g01350.1 N 0.771
MDP0000243086 Malus x domestica MDP0000243086 N 0.771
mgf002273m Mimulus guttatus mgf002273m N 0.765
ppa002413m Prunus persica ppa002413m N 0.762
BGIOSIBCE010969 Oryza indica BGIOSIBCE010969 N 0.759
LOC_Os03g21140 Oryza sativa LOC_Os03g21140 N 0.759
MDP0000220601 Malus x domestica MDP0000220601 N 0.759
GSVIVG00001467001 Vitis vinifera GSVIVG00001467001 N 0.759
cassava2158.valid.m1 Manihot esculenta cassava2158.valid.m1 N 0.759
mgf000973m Mimulus guttatus mgf000973m N 0.753
B9HNZ4_POPTR Populus trichocarpa POPTR_0009s05520 N 0.750
GSVIVG00031538001 Vitis vinifera GSVIVG00031538001 N 0.750
LOC_Os07g48410 Oryza sativa LOC_Os07g48410 N 0.747
GRMZM2G311665 Zea mays GRMZM2G311665 N 0.747
SB02G043180 Sorghum bicolor Sb02g043180 N 0.747
Medtr4g118330 Medicago truncatula Medtr4g118330 N 0.747
BGIOSIBCE010970 Oryza indica BGIOSIBCE010970 N 0.747
BGIOSIBCE026070 Oryza indica BGIOSIBCE026070 N 0.747
LOC_Os03g21160 Oryza sativa LOC_Os03g21160 N 0.747
BRADI1G63570 Brachypodium distachyon BRADI1G63570 N 0.747
mgf014647m Mimulus guttatus mgf014647m N 0.735
SB01G036490 Sorghum bicolor Sb01g036490 N 0.735
MDP0000259773 Malus x domestica MDP0000259773 N 0.735
GRMZM2G003424 Zea mays GRMZM2G003424 N 0.735
MDP0000256775 Malus x domestica MDP0000256775 N 0.735
GRMZM2G086614 Zea mays GRMZM2G086614 N 0.735
BRADI1G17510 Brachypodium distachyon BRADI1G17510 N 0.735
Cucsa.333940 Cucumis sativus Cucsa.333940 N 0.721
GRMZM2G368883 Zea mays GRMZM2G368883 N 0.714
XM_002877790.1 Arabidopsis lyrata fgenesh2_kg.5__1545__AT3G51950.1 N 0.713
AT3G51950 Arabidopsis thaliana AT3G51950-TAIR-G N 0.713
ppa002383m Prunus persica ppa002383m N 0.709
Glyma11g01780.1 Glycine max Glyma11g01780.1 N 0.701
Glyma01g43700.1 Glycine max Glyma01g43700.1 N 0.701