SB01G016170 (Sorghum bicolor)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Sb01g016170 T45880_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb01g016170.1 RRM 74 142
Sb01g016170.1 RRM 167 238
Sb01g016170.1 RRM 276 340

Links

Other RRM family RBPs
Other Sorghum bicolor RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os03g37270 Oryza sativa LOC_Os03g37270 N 0.899
XM_002864318.1 Arabidopsis lyrata fgenesh2_kg.8__1388__AT5G54900.1 N 0.721
LOC_Os08g09100 Oryza sativa LOC_Os08g09100 N 0.720
cassava37003.valid.m1 Manihot esculenta cassava37003.valid.m1 I 0.716
ATRBP45A Arabidopsis thaliana AT5G54900-TAIR-G N 0.716
cassava37002.valid.m1 Manihot esculenta cassava37002.valid.m1 I 0.716
mgf010468m Mimulus guttatus mgf010468m I 0.716
cassava37000.valid.m1 Manihot esculenta cassava37000.valid.m1 I 0.716
cassava37001.valid.m1 Manihot esculenta cassava37001.valid.m1 I 0.716
cassava36999.valid.m1 Manihot esculenta cassava36999.valid.m1 I 0.716
Cucsa.085910 Cucumis sativus Cucsa.085910 I 0.715
BGIOSIBSE038779 Oryza indica BGIOSIBSE038779 N 0.715
BRADI3G15180 Brachypodium distachyon BRADI3G15180 N 0.715
Cucsa.085920 Cucumis sativus Cucsa.085920 I 0.715
PK10695.1 Cannabis sativa PK10695.1 I 0.710
MDP0000294628 Malus x domestica MDP0000294628 I 0.710
Medtr8g146650 Medicago truncatula Medtr8g146650 N 0.709
mgf014417m Mimulus guttatus mgf014417m N 0.707
cassava35906.valid.m1 Manihot esculenta cassava35906.valid.m1 I 0.707
29842.m003612 Ricinus communis 29842.m003612 N 0.705
Glyma13g27570.1 Glycine max Glyma13g27570.1 I 0.704
29666.m001436 Ricinus communis 29666.m001436 I 0.702
B9MVK8_POPTR Populus trichocarpa POPTR_0014s03390 I 0.700
BRADI5G22410 Brachypodium distachyon BRADI5G22410 N 0.700