LOC_Os03g37270 (Oryza sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 LOC_Os03g37270 T44999_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os03g37270.1 RRM 69 139
LOC_Os03g37270.1 RRM 162 233
LOC_Os03g37270.1 RRM 270 334
LOC_Os03g37270.2 RRM 69 139
LOC_Os03g37270.2 RRM 162 233
LOC_Os03g37270.2 RRM 270 334

Links

Other RRM family RBPs
Other Oryza sativa RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SB01G016170 Sorghum bicolor Sb01g016170 N 0.899
mgf010468m Mimulus guttatus mgf010468m I 0.740
cassava37000.valid.m1 Manihot esculenta cassava37000.valid.m1 I 0.726
cassava37001.valid.m1 Manihot esculenta cassava37001.valid.m1 I 0.726
cassava37002.valid.m1 Manihot esculenta cassava37002.valid.m1 I 0.726
cassava36999.valid.m1 Manihot esculenta cassava36999.valid.m1 I 0.726
cassava37003.valid.m1 Manihot esculenta cassava37003.valid.m1 I 0.726
LOC_Os08g09100 Oryza sativa LOC_Os08g09100 N 0.726
BGIOSIBSE038779 Oryza indica BGIOSIBSE038779 N 0.721
Cucsa.085910 Cucumis sativus Cucsa.085910 I 0.716
Cucsa.085920 Cucumis sativus Cucsa.085920 I 0.716
XM_002867483.1 Arabidopsis lyrata scaffold_701590.1 I 0.716
cassava35906.valid.m1 Manihot esculenta cassava35906.valid.m1 I 0.712
MDP0000294628 Malus x domestica MDP0000294628 I 0.712
ATRBP45A Arabidopsis thaliana AT5G54900-TAIR-G N 0.712
ppa006577m Prunus persica ppa006577m I 0.712
XM_002864318.1 Arabidopsis lyrata fgenesh2_kg.8__1388__AT5G54900.1 N 0.707
ppa006617m Prunus persica ppa006617m N 0.707
29666.m001436 Ricinus communis 29666.m001436 I 0.707
mgf014417m Mimulus guttatus mgf014417m N 0.707
BRADI5G22410 Brachypodium distachyon BRADI5G22410 N 0.702
PK10695.1 Cannabis sativa PK10695.1 I 0.702
LOC_Os04g53440 Oryza sativa LOC_Os04g53440 N 0.702
BGIOSIBCE016680 Oryza indica BGIOSIBCE016680 N 0.702
ATRBP45C Arabidopsis thaliana AT4G27000-TAIR-G N 0.702
MDP0000614064 Malus x domestica MDP0000614064 N 0.702
ATRBP45B Arabidopsis thaliana AT1G11650-TAIR-G N 0.702