e_gw1.24.89.1 (Selaginella moellendorfii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.24.89.1 T49892_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.24.89.1 RRM 39 109
e_gw1.24.89.1 RRM 127 195
e_gw1.24.89.1 RRM 218 287
e_gw1.24.89.1 RRM 321 390

Links

Other RRM family RBPs
Other Selaginella moellendorfii RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1.C_1260120 Physcomitrella patens estExt_Genewise1.C_1260120 N 0.776
e_gw1.51.213.1 Physcomitrella patens e_gw1.51.213.1 N 0.776
estExt_fgenesh1_pm.C_2810008 Physcomitrella patens estExt_fgenesh1_pm.C_2810008 N 0.769
estExt_fgenesh1_pg.C_2570045 Physcomitrella patens estExt_fgenesh1_pg.C_2570045 N 0.765
gw1.0.426.1 Selaginella moellendorfii gw1.0.426.1 N 0.751
GSVIVG00009455001 Vitis vinifera GSVIVG00009455001 N 0.733
Cucsa.219740 Cucumis sativus Cucsa.219740 N 0.733
Glyma02g11580.1 Glycine max Glyma02g11580.1 N 0.733
MDP0000253709 Malus x domestica MDP0000253709 N 0.733
MDP0000156895 Malus x domestica MDP0000156895 N 0.733
MDP0000497543 Malus x domestica MDP0000497543 N 0.730
30170.m013847 Ricinus communis 30170.m013847 N 0.730
Glyma07g33860.1 Glycine max Glyma07g33860.1 N 0.730
GSVIVG00022079001 Vitis vinifera GSVIVG00022079001 N 0.730
Medtr4g130250 Medicago truncatula Medtr4g130250 N 0.730
cassava12359.valid.m1 Manihot esculenta cassava12359.valid.m1 N 0.726
B9HS30_POPTR Populus trichocarpa POPTR_0009s10220 N 0.722
A9PEX9_POPTR Populus trichocarpa POPTR_0001s31160 N 0.722
cassava6947.valid.m1 Manihot esculenta cassava6947.valid.m1 N 0.722
ppa002607m Prunus persica ppa002607m N 0.722
mgf004973m Mimulus guttatus mgf004973m N 0.719
29801.m003152 Ricinus communis 29801.m003152 N 0.719
B9GNU4_POPTR Populus trichocarpa POPTR_0014s02550 N 0.712
POPTR_0002s12570 Populus trichocarpa POPTR_0002s12570 N 0.712
Sb02g017910 Sorghum bicolor Sb02g017910 N 0.708
Cucsa.244510 Cucumis sativus Cucsa.244510 N 0.708
LOC_Os09g02700 Oryza sativa LOC_Os09g02700 N 0.708
BGIOSIBCE029001 Oryza indica BGIOSIBCE029001 N 0.708
cassava17495.valid.m1 Manihot esculenta cassava17495.valid.m1 N 0.708
PK02172.1 Cannabis sativa PK02172.1 N 0.708
XM_002883853.1 Arabidopsis lyrata scaffold_303734.1 N 0.705
mgf009542m Mimulus guttatus mgf009542m N 0.705
BGIOSIBCE027387 Oryza indica BGIOSIBCE027387 N 0.702
LOC_Os08g22354 Oryza sativa LOC_Os08g22354 N 0.702
GRMZM2G102829 Zea mays GRMZM2G102829 N 0.701
Medtr3g147440 Medicago truncatula Medtr3g147440 N 0.701