FUBP1 (Taeniopygia guttata)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSTGUG00000006841 T19577_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHSRP
M342_0.6 		Homo sapiens Sequence logo not available CnsCyUCC RIP-chip
Cook et al.(2011)
906_17437629.3 		0.749
KHSRP
M341_0.6 		Homo sapiens Sequence logo not available nUGUrUrU RIP-chip
Cook et al.(2011)
906_17437629.2 		0.749
KHSRP
M340_0.6 		Homo sapiens Sequence logo not available UwUAUUUw RIP-chip
Cook et al.(2011)
906_17437629.1 		0.749
KHSRP
M339_0.6 		Homo sapiens Sequence logo not available UAUUUAUw RIP-chip
Cook et al.(2011)
906_17437629 		0.749
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000007113 KH 61 123
ENSTGUP00000007113 KH 146 210
ENSTGUP00000007113 KH 236 298
ENSTGUP00000007113 KH 337 408

Links

Other KH family RBPs
Other Taeniopygia guttata RBPs

104 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCAFG00000023462 Canis familiaris ENSCAFG00000023462 N 0.000
ENSCHOG00000001614 Choloepus hoffmanni ENSCHOG00000001614 N 0.000
LOC100392844 Callithrix jacchus ENSCJAG00000019154 N 0.000
HNRNPH1 Dasypus novemcinctus ENSDNOG00000007173 N 0.000
ENSDORG00000008260 Dipodomys ordii ENSDORG00000008260 N 0.000
Hnrnph3 Dipodomys ordii ENSDORG00000011470 N 0.000
HNRNPH1 Gasterosteus aculeatus ENSGACG00000018352 I 0.000
HNRNPH1 Tetraodon nigroviridis ENSTNIG00000008997 N 0.000