AAI69815 (Xenopus laevis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 AAI69815 T22142_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHSRP
M339_0.6 		Homo sapiens Sequence logo not available UAUUUAUw RIP-chip
Cook et al.(2011)
906_17437629 		0.747
KHSRP
M342_0.6 		Homo sapiens Sequence logo not available CnsCyUCC RIP-chip
Cook et al.(2011)
906_17437629.3 		0.747
KHSRP
M341_0.6 		Homo sapiens Sequence logo not available nUGUrUrU RIP-chip
Cook et al.(2011)
906_17437629.2 		0.747
KHSRP
M340_0.6 		Homo sapiens Sequence logo not available UwUAUUUw RIP-chip
Cook et al.(2011)
906_17437629.1 		0.747
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AAI69815 KH 90 152
AAI69815 KH 175 239
AAI69815 KH 265 327
AAI69815 KH 366 431

Links

Other KH family RBPs
Other Xenopus laevis RBPs

105 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH44277 Xenopus laevis AAH44277 I 0.957
AAH60400 Xenopus laevis AAH60400 N 0.771
AAH70981 Xenopus laevis AAH70981 I 1.000
AAI61696 Xenopus laevis AAI61696 I 0.735
AAI69923 Xenopus laevis AAI69923 I 0.728
AAN77160 Xenopus laevis AAN77160 I 0.728
AAN77161 Xenopus laevis AAN77161 I 0.973
Ame_R003042 Ailuropoda melanoleuca Ame_R003042 N 0.764
Ame_R010564 Ailuropoda melanoleuca Ame_R010564 I 0.922
Ame_R016412 Ailuropoda melanoleuca Ame_R016412 I 0.747
FUBP1 Anolis carolinensis ENSACAG00000006310 I 0.926
KHSRP Anolis carolinensis ENSACAG00000015398 I 0.751
Q08DJ3_BOVIN Bos taurus ENSBTAG00000008926 I 0.926
A6QP83_BOVIN Bos taurus ENSBTAG00000013072 N 0.760
LOC505564 Bos taurus ENSBTAG00000021018 I 0.747
KHSRP Canis familiaris ENSCAFG00000018667 I 0.747
FUBP3 Canis familiaris ENSCAFG00000019942 N 0.760
FUBP1 Canis familiaris ENSCAFG00000020361 I 0.926
FUBP1 Choloepus hoffmanni ENSCHOG00000008177 I 0.926
FUBP1 Callithrix jacchus ENSCJAG00000007062 I 0.926
KHSRP Callithrix jacchus ENSCJAG00000016627 I 0.747
LOC100399862 Callithrix jacchus ENSCJAG00000020542 N 0.767
FUBP1 Cavia porcellus ENSCPOG00000002757 I 0.926
KHSRP Cavia porcellus ENSCPOG00000005140 I 0.747
FUBP3 Cavia porcellus ENSCPOG00000010315 N 0.767
ENSDARG00000007049 Danio rerio ENSDARG00000007049 N 0.752
KHSRP Danio rerio ENSDARG00000026489 I 0.720
fubp1 Danio rerio ENSDARG00000029248 I 0.868
FUBP3 Dasypus novemcinctus ENSDNOG00000014533 N 0.744
Khsrp Dipodomys ordii ENSDORG00000002447 I 0.743
Fubp1 Dipodomys ordii ENSDORG00000016534 I 0.926
FUBP1 Equus caballus ENSECAG00000010867 I 0.926
LOC100069755 Equus caballus ENSECAG00000011500 N 0.729
LOC100065608 Equus caballus ENSECAG00000018305 I 0.747
KHSRP Felis catus ENSFCAG00000003731 I 0.747
FUBP3 Felis catus ENSFCAG00000005113 N 0.756
KHSRP Homo sapiens ENSG00000088247 D 0.747
FUBP3 Homo sapiens ENSG00000107164 N 0.764
FUBP1 Homo sapiens ENSG00000162613 I 0.930
KHSRP Gasterosteus aculeatus ENSGACG00000012422 I 0.716
ENSGACG00000016563 Gasterosteus aculeatus ENSGACG00000016563 I 0.865
FUBP3 Gasterosteus aculeatus ENSGACG00000016704 N 0.717
Q5ZM76_CHICK Gallus gallus ENSGALG00000003941 N 0.767
Q5ZHW0_CHICK Gallus gallus ENSGALG00000008939 I 0.915
KHSRP Gorilla gorilla ENSGGOG00000007028 I 0.747
FUBP3 Gorilla gorilla ENSGGOG00000011318 N 0.764
FUBP1 Gorilla gorilla ENSGGOG00000027554 I 0.930
KHSRP Loxodonta africana ENSLAFG00000002426 I 0.747
FUBP1 Loxodonta africana ENSLAFG00000003273 I 0.926
FUBP3 Loxodonta africana ENSLAFG00000011611 N 0.760
KHSRP Macropus eugenii ENSMEUG00000016601 I 0.704
FUBP3 Meleagris gallopavo ENSMGAG00000005342 N 0.767
FUBP1 Meleagris gallopavo ENSMGAG00000009424 I 0.914
KHSRP Microcebus murinus ENSMICG00000007863 I 0.732
FUBP1 Microcebus murinus ENSMICG00000014463 N 0.782
FUBP3 Microcebus murinus ENSMICG00000015452 N 0.767
FUBP3 Myotis lucifugus ENSMLUG00000008743 N 0.725
FUBP1 Myotis lucifugus ENSMLUG00000014802 I 0.926
FUBP1 Macaca mulatta ENSMMUG00000002899 I 0.930
KHSRP Macaca mulatta ENSMMUG00000005597 I 0.747
FUBP3 Macaca mulatta ENSMMUG00000008249 N 0.764
FUBP3 Monodelphis domestica ENSMODG00000012105 N 0.756
Khsrp Mus musculus ENSMUSG00000007670 I 0.747
Fubp3 Mus musculus ENSMUSG00000026843 N 0.756
Fubp1 Mus musculus ENSMUSG00000028034 I 0.922
FUBP3 Ornithorhynchus anatinus ENSOANG00000001042 N 0.771
FUBP1 Ornithorhynchus anatinus ENSOANG00000009777 I 0.926
FUBP1 Oryctolagus cuniculus ENSOCUG00000002225 I 0.869
FUBP1 Otolemur garnettii ENSOGAG00000014233 I 0.926
FUBP1 Ochotona princeps ENSOPRG00000001175 N 0.829
FUBP3 Ochotona princeps ENSOPRG00000008648 N 0.760
KHSRP Ochotona princeps ENSOPRG00000010594 I 0.743
ENSORLG00000003540 Oryzias latipes ENSORLG00000003540 I 0.856
FUBP3 Oryzias latipes ENSORLG00000007103 N 0.713
FUBP3 Oryzias latipes ENSORLG00000017565 N 0.740
FUBP3 Procavia capensis ENSPCAG00000001717 N 0.744
FUBP1 Procavia capensis ENSPCAG00000012617 I 0.926
ENSPPYG00000001219 Pongo pygmaeus ENSPPYG00000001219 I 0.930
ENSPPYG00000009454 Pongo pygmaeus ENSPPYG00000009454 I 0.747
ENSPPYG00000019693 Pongo pygmaeus ENSPPYG00000019693 N 0.764
FUBP1 Pan troglodytes ENSPTRG00000000888 I 0.930
KHSRP Pan troglodytes ENSPTRG00000010364 I 0.747
FUBP3 Pan troglodytes ENSPTRG00000021474 N 0.764
FUBP3 Pteropus vampyrus ENSPVAG00000001510 N 0.767
KHSRP Pteropus vampyrus ENSPVAG00000007251 I 0.747
FUBP1 Pteropus vampyrus ENSPVAG00000014637 N 0.767
Fubp3 Rattus norvegicus ENSRNOG00000009139 N 0.760
ENSSSCG00000003767 Sus scrofa ENSSSCG00000003767 I 0.926
ENSSSCG00000003771 Sus scrofa ENSSSCG00000003771 I 0.926
KHSRP Sus scrofa ENSSSCG00000013538 I 0.747
KHSRP Spermophilus tridecemlineatus ENSSTOG00000002371 I 0.747
FUBP1 Spermophilus tridecemlineatus ENSSTOG00000014312 I 0.918
FUBP3 Taeniopygia guttata ENSTGUG00000004662 N 0.764
FUBP1 Taeniopygia guttata ENSTGUG00000006841 I 0.901
FUBP3 Tetraodon nigroviridis ENSTNIG00000005858 N 0.744
FUBP3 Tetraodon nigroviridis ENSTNIG00000009019 N 0.713
ENSTRUG00000004615 Takifugu rubripes ENSTRUG00000004615 I 0.860
FUBP3 Takifugu rubripes ENSTRUG00000013259 N 0.740
FUBP3 Takifugu rubripes ENSTRUG00000018658 N 0.717
FUBP1 Tarsius syrichta ENSTSYG00000000148 I 0.918
FUBP1 Tursiops truncatus ENSTTRG00000000096 I 0.926
KHSRP Tursiops truncatus ENSTTRG00000010390 I 0.747
FUBP1 Vicugna pacos ENSVPAG00000004709 I 0.926
fubp3 Xenopus tropicalis ENSXETG00000001344 N 0.767
fubp1 Xenopus tropicalis ENSXETG00000013137 I 0.981