PABPC4 (Myotis lucifugus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMLUG00000012068 T38735_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPC4
M042_0.6 		Homo sapiens AAAAAAR RNAcompete
Ray et al.(2013)
RNCMPT00043 		0.779
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMLUP00000010997 RRM 13 35
ENSMLUP00000010997 RRM 68 136
ENSMLUP00000010997 RRM 160 229
ENSMLUP00000010997 RRM 263 330

Links

Other RRM family RBPs
Other Myotis lucifugus RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH45086 Xenopus laevis AAH45086 N 0.000
AAH77169 Xenopus laevis AAH77169 I 0.000
AAH80105 Xenopus laevis AAH80105 I 0.000
Ame_R002705 Ailuropoda melanoleuca Ame_R002705 I 0.000
Ame_R003219 Ailuropoda melanoleuca Ame_R003219 N 0.000
CAC95017 Xenopus laevis CAC95017 N 0.000
CAC95018 Xenopus laevis CAC95018 I 0.000
ENSACAG00000009648 Anolis carolinensis ENSACAG00000009648 I 0.000
TIAL1 Anolis carolinensis ENSACAG00000016986 I 0.000
A1A4R7_BOVIN Bos taurus ENSBTAG00000004080 I 0.000
Q0VBZ6_BOVIN Bos taurus ENSBTAG00000019182 I 0.000
TIA1 Canis familiaris ENSCAFG00000003341 I 0.000
TIAL1 Canis familiaris ENSCAFG00000012171 I 0.000
TIA1 Choloepus hoffmanni ENSCHOG00000003904 I 0.000
TIA1 Callithrix jacchus ENSCJAG00000019278 I 0.000
TIAL1 Callithrix jacchus ENSCJAG00000019682 I 0.000
TIA1 Cavia porcellus ENSCPOG00000008327 I 0.000
tial1 Danio rerio ENSDARG00000009525 I 0.000
tia1l Danio rerio ENSDARG00000026476 I 0.000
tia1 Danio rerio ENSDARG00000052536 I 0.000
TIAL1 Dasypus novemcinctus ENSDNOG00000009552 I 0.000
TIA1 Dasypus novemcinctus ENSDNOG00000016356 I 0.000
Tia1 Dipodomys ordii ENSDORG00000008601 I 0.000
Tial1 Dipodomys ordii ENSDORG00000010683 I 0.000
TIAL1 Equus caballus ENSECAG00000009970 I 0.000
TIA1 Equus caballus ENSECAG00000022361 I 0.000
TIAL1 Erinaceus europaeus ENSEEUG00000011861 N 0.000
TIA1 Echinops telfairi ENSETEG00000010021 I 0.000
TIAL1 Echinops telfairi ENSETEG00000020276 N 0.000
TIA1 Homo sapiens ENSG00000116001 D 0.000
TIAL1 Homo sapiens ENSG00000151923 D 0.000
TIAL1 Gasterosteus aculeatus ENSGACG00000003365 I 0.000
TIA1 Gasterosteus aculeatus ENSGACG00000013294 I 0.000
TIA1 Gasterosteus aculeatus ENSGACG00000015800 I 0.000
Q800W1_CHICK Gallus gallus ENSGALG00000009427 I 0.000
Q800W4_CHICK Gallus gallus ENSGALG00000013879 I 0.000
TIAL1 Gorilla gorilla ENSGGOG00000001816 I 0.000
TIAL1 Loxodonta africana ENSLAFG00000003412 N 0.000
TIA1 Loxodonta africana ENSLAFG00000003463 I 0.000
TIA1 Macropus eugenii ENSMEUG00000013220 I 0.000
TIA1 Meleagris gallopavo ENSMGAG00000003493 I 0.000
TIAL1 Meleagris gallopavo ENSMGAG00000011368 N 0.000
TIA1 Microcebus murinus ENSMICG00000002434 I 0.000
TIAL1 Myotis lucifugus ENSMLUG00000004645 N 0.000
TIA1 Macaca mulatta ENSMMUG00000001126 I 0.000
TIAL1 Macaca mulatta ENSMMUG00000001472 I 0.000
TIAL1 Monodelphis domestica ENSMODG00000008865 I 0.000
TIA1 Monodelphis domestica ENSMODG00000011515 I 0.000
Tial1 Mus musculus ENSMUSG00000030846 I 0.000
Tia1 Mus musculus ENSMUSG00000071337 I 0.000
TIAL1 Ornithorhynchus anatinus ENSOANG00000004896 I 0.000
TIAL1 Oryctolagus cuniculus ENSOCUG00000003783 I 0.000
TIA1 Oryctolagus cuniculus ENSOCUG00000011204 I 0.000
TIA1 Otolemur garnettii ENSOGAG00000010572 I 0.000
TIAL1 Otolemur garnettii ENSOGAG00000011417 N 0.000
TIA1 Ochotona princeps ENSOPRG00000001066 I 0.000
TIAL1 Ochotona princeps ENSOPRG00000016546 I 0.000
TIA1 Oryzias latipes ENSORLG00000002529 I 0.000
TIAL1 Oryzias latipes ENSORLG00000013798 I 0.000
TIA1 Oryzias latipes ENSORLG00000015642 I 0.000
TIA1 Procavia capensis ENSPCAG00000001859 I 0.000
TIAL1 Procavia capensis ENSPCAG00000003192 I 0.000
ENSPPYG00000002703 Pongo pygmaeus ENSPPYG00000002703 I 0.000
ENSPPYG00000012326 Pongo pygmaeus ENSPPYG00000012326 I 0.000
TIAL1 Pan troglodytes ENSPTRG00000002996 I 0.000
TIA1 Pan troglodytes ENSPTRG00000023495 I 0.000
TIA1 Pteropus vampyrus ENSPVAG00000004846 I 0.000
TIAL1 Pteropus vampyrus ENSPVAG00000017585 I 0.000
Tia1 Rattus norvegicus ENSRNOG00000016813 I 0.000
Tial1 Rattus norvegicus ENSRNOG00000020271 I 0.000
TIA1 Sorex araneus ENSSARG00000001997 I 0.000
TIAL1 Sorex araneus ENSSARG00000012980 N 0.000
ENSSSCG00000010685 Sus scrofa ENSSSCG00000010685 I 0.000
ENSTBEG00000017228 Tupaia belangeri ENSTBEG00000017228 I 0.000
TIAL1 Taeniopygia guttata ENSTGUG00000011148 N 0.000
TIA1 Taeniopygia guttata ENSTGUG00000017307 I 0.000
TIA1 Tetraodon nigroviridis ENSTNIG00000011433 I 0.000
TIAL1 Tetraodon nigroviridis ENSTNIG00000013091 I 0.000
TIA1 Tetraodon nigroviridis ENSTNIG00000013470 I 0.000
TIA1 Takifugu rubripes ENSTRUG00000005456 I 0.000
TIA1 Takifugu rubripes ENSTRUG00000015136 I 0.000
TIAL1 Takifugu rubripes ENSTRUG00000017931 I 0.000
TIAL1 Tarsius syrichta ENSTSYG00000004348 I 0.000
TIA1 Tursiops truncatus ENSTTRG00000001195 I 0.000
TIAL1 Tursiops truncatus ENSTTRG00000014574 I 0.000
TIAL1 Vicugna pacos ENSVPAG00000001240 I 0.000
TIA1 Vicugna pacos ENSVPAG00000007449 I 0.000
tia1 Xenopus tropicalis ENSXETG00000008514 I 0.000
tial1 Xenopus tropicalis ENSXETG00000010234 N 0.000
estExt_fgenesh2_pg.C_1430023 Branchiostoma floridae estExt_fgenesh2_pg.C_1430023 I 0.000
gw.406.24.1 Branchiostoma floridae gw.406.24.1 I 0.000