CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ENSMLUG00000013041
(
Myotis lucifugus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMLUG00000013041
T38744_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000011861
RRM
104
172
LLLSNLDFRVSDADIQQLFAEFGPLKHAAVHYDRSGRSLGTAHVHFERKADALEARKQYNGVPLDVNRR
Links
Other
RRM
family RBPs
Other
Myotis lucifugus
RBPs
81 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
97663
Helobdella robusta
97663
N
0.000
AAEL005114
Aedes aegypti
AAEL005114
N
0.700
AAEL015263
Aedes aegypti
AAEL015263
N
0.700
AAH74336
Xenopus laevis
AAH74336
N
0.814
AAH92013
Xenopus laevis
AAH92013
N
0.814
AGAP006733
Anopheles gambiae
AGAP006733
N
0.700
amel4_ncbi_hmm10980
Apis mellifera
amel4_ncbi_hmm10980
N
0.743
Ame_R000656
Ailuropoda melanoleuca
Ame_R000656
N
0.814
Aqu1.225634
Amphimedon queenslandica
Aqu1.225634
N
0.000
BGIBMGA005323
Bombyx mori
BGIBMGA005323
N
0.729
CPIJ007834
Culex quinquefasciatus
CPIJ007834
N
0.700
CpipJ_CPIJ007834
Culex pipiens
CpipJ_CPIJ007834
N
0.700
DGIL_AUG5s14095g4t3
Acyrtosiphon pisum
DGIL_AUG5s14095g4t3
N
0.000
THOC4
Anolis carolinensis
ENSACAG00000010526
N
0.814
THOC4_BOVIN
Bos taurus
ENSBTAG00000008498
N
0.814
THOC4
Canis familiaris
ENSCAFG00000005877
N
0.814
ENSCING00000013568
Ciona intestinalis
ENSCING00000013568
N
0.000
ENSCJAG00000021543
Callithrix jacchus
ENSCJAG00000021543
N
0.768
THOC4
Cavia porcellus
ENSCPOG00000013710
N
0.814
Q8MY63_CIOSA
Ciona savignyi
ENSCSAVG00000003324
N
0.000
tho4
Danio rerio
ENSDARG00000077732
N
0.814
LOC100055097
Equus caballus
ENSECAG00000018754
N
0.814
THOC4
Erinaceus europaeus
ENSEEUG00000010164
N
0.826
THOC4
Echinops telfairi
ENSETEG00000016596
N
0.814
THOC4
Homo sapiens
ENSG00000183684
N
0.814
THOC4
Gasterosteus aculeatus
ENSGACG00000013328
N
0.757
ENSGACG00000018178
Gasterosteus aculeatus
ENSGACG00000018178
N
0.700
THOC4
Gallus gallus
ENSGALG00000007237
N
0.814
THOC4
Gorilla gorilla
ENSGGOG00000013935
N
0.814
THOC4
Loxodonta africana
ENSLAFG00000003083
N
0.814
THOC4
Macropus eugenii
ENSMEUG00000002210
N
0.000
ENSMGAG00000005389
Meleagris gallopavo
ENSMGAG00000005389
N
0.814
THOC4
Microcebus murinus
ENSMICG00000017403
N
0.814
ENSMLUG00000001217
Myotis lucifugus
ENSMLUG00000001217
N
1.000
ENSMLUG00000001244
Myotis lucifugus
ENSMLUG00000001244
N
1.000
ENSMLUG00000002626
Myotis lucifugus
ENSMLUG00000002626
N
0.913
ENSMLUG00000002669
Myotis lucifugus
ENSMLUG00000002669
N
0.957
ENSMLUG00000004521
Myotis lucifugus
ENSMLUG00000004521
N
1.000
ENSMLUG00000004992
Myotis lucifugus
ENSMLUG00000004992
N
0.913
ENSMLUG00000006641
Myotis lucifugus
ENSMLUG00000006641
N
0.957
ENSMLUG00000007513
Myotis lucifugus
ENSMLUG00000007513
N
0.928
ENSMLUG00000007617
Myotis lucifugus
ENSMLUG00000007617
N
0.928
ENSMLUG00000007634
Myotis lucifugus
ENSMLUG00000007634
N
0.971
ENSMLUG00000008410
Myotis lucifugus
ENSMLUG00000008410
N
0.884
ENSMLUG00000008923
Myotis lucifugus
ENSMLUG00000008923
N
0.971
ENSMLUG00000009247
Myotis lucifugus
ENSMLUG00000009247
N
0.899
ENSMLUG00000009447
Myotis lucifugus
ENSMLUG00000009447
N
0.957
ENSMLUG00000009449
Myotis lucifugus
ENSMLUG00000009449
N
0.957
ENSMLUG00000009555
Myotis lucifugus
ENSMLUG00000009555
N
0.800
ENSMLUG00000009822
Myotis lucifugus
ENSMLUG00000009822
N
0.971
ENSMLUG00000010127
Myotis lucifugus
ENSMLUG00000010127
N
0.957
ENSMLUG00000010456
Myotis lucifugus
ENSMLUG00000010456
N
0.957
ENSMLUG00000010927
Myotis lucifugus
ENSMLUG00000010927
N
0.971
ENSMLUG00000011212
Myotis lucifugus
ENSMLUG00000011212
N
0.957
ENSMLUG00000011599
Myotis lucifugus
ENSMLUG00000011599
N
0.971
ENSMLUG00000013085
Myotis lucifugus
ENSMLUG00000013085
N
0.971
ENSMLUG00000014480
Myotis lucifugus
ENSMLUG00000014480
N
0.942
ENSMLUG00000015043
Myotis lucifugus
ENSMLUG00000015043
N
0.971
ENSMLUG00000015142
Myotis lucifugus
ENSMLUG00000015142
N
0.913
ENSMLUG00000016194
Myotis lucifugus
ENSMLUG00000016194
N
0.957
THOC4
Macaca mulatta
ENSMMUG00000012884
N
0.814
THOC4
Monodelphis domestica
ENSMODG00000003030
N
0.814
Thoc4
Mus musculus
ENSMUSG00000025134
N
0.814
Refbp2
Mus musculus
ENSMUSG00000060244
N
0.771
Gm5698
Mus musculus
ENSMUSG00000086151
N
0.757
Gm5699
Mus musculus
ENSMUSG00000087346
N
0.757
THOC4
Otolemur garnettii
ENSOGAG00000012409
N
0.814
THOC4
Ochotona princeps
ENSOPRG00000005551
N
0.000
ENSORLG00000001620
Oryzias latipes
ENSORLG00000001620
N
0.000
THOC4
Oryzias latipes
ENSORLG00000012331
N
0.786
ENSPPYG00000008749
Pongo pygmaeus
ENSPPYG00000008749
N
0.814
THOC4
Pan troglodytes
ENSPTRG00000009774
N
0.814
THOC4
Pteropus vampyrus
ENSPVAG00000017866
N
0.814
Thoc4
Rattus norvegicus
ENSRNOG00000036687
N
0.826
ENSTBEG00000005834
Tupaia belangeri
ENSTBEG00000005834
N
0.814
ENSTBEG00000013201
Tupaia belangeri
ENSTBEG00000013201
N
0.714
THOC4
Taeniopygia guttata
ENSTGUG00000003513
N
0.000
THOC4
Tetraodon nigroviridis
ENSTNIG00000011595
N
0.786
ENSTNIG00000014136
Tetraodon nigroviridis
ENSTNIG00000014136
N
0.725
ENSTRUG00000003051
Takifugu rubripes
ENSTRUG00000003051
N
0.743
THOC4
Takifugu rubripes
ENSTRUG00000008828
N
0.786
THOC4
Tursiops truncatus
ENSTTRG00000012275
N
0.814
thoc4
Xenopus tropicalis
ENSXETG00000005391
N
0.814
estExt_fgenesh1_pg.C_6740009
Capitella teleta
estExt_fgenesh1_pg.C_6740009
N
0.000
estExt_Genewise1.C_7200001
Capitella teleta
estExt_Genewise1.C_7200001
N
0.000
e_gw.394.68.1
Branchiostoma floridae
e_gw.394.68.1
N
0.743
e_gw.5.817.1
Branchiostoma floridae
e_gw.5.817.1
N
0.743
Aly
Drosophila melanogaster
FBgn0010774
N
0.000
aly
Drosophila yakuba
FBgn0068000
N
0.000
GA10707-RA
Drosophila pseudoobscura
FBgn0070763
N
0.000
GF17326
Drosophila ananassae
FBgn0094344
N
0.000
GG10124
Drosophila erecta
FBgn0102435
N
0.000
GH18594
Drosophila grimshawi
FBgn0126061
N
0.000
GI23076
Drosophila mojavensis
FBgn0145803
N
0.000
GL12678
Drosophila persimilis
FBgn0150284
N
0.000
GM10513
Drosophila sechellia
FBgn0165460
N
0.000
GD19510
Drosophila simulans
FBgn0191006
N
0.000
GJ22697
Drosophila virilis
FBgn0209801
N
0.000
GK12741
Drosophila willistoni
FBgn0214750
N
0.000
fgeneshTA2_pg.C_scaffold_2000899
Trichoplax adhaerens
fgeneshTA2_pg.C_scaffold_2000899
N
0.000
ISCW001860
Ixodes scapularis
ISCW001860
N
0.714
nasonia_NCBI_hmm488134
Nasonia vitripennis
nasonia_NCBI_hmm488134
N
0.000
PASA_GEN_1400063
Daphnia pulex
PASA_GEN_1400063
N
0.729
PHUM023420
Pediculus humanus
PHUM023420
N
0.000
Q6GLW1
Xenopus laevis
Q6GLW1
N
0.814
Smp_108820
Schistosoma mansoni
Smp_108820
N
0.729
SNAPOd2T00000646001
Oikopleura dioica
SNAPOd2T00000646001
N
0.000
SNAPOd2T00000651001
Oikopleura dioica
SNAPOd2T00000651001
N
0.000
XP_001185635.1
Strongylocentrotus purpuratus
XP_001185635.1
N
0.000
XP_002155396.1
Hydra magnipapillata
XP_002155396.1
N
0.000
XP_782040.2
Strongylocentrotus purpuratus
XP_782040.2
N
0.000