GSVIVG00029865001 (Vitis vinifera)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 GSVIVG00029865001 T20105_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00029865001 KH 144 214

Links

Other KH family RBPs
Other Vitis vinifera RBPs

56 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa009701m Prunus persica ppa009701m N 0.893
GRMZM2G108677 Zea mays GRMZM2G108677 N 0.836
GRMZM2G063643 Zea mays GRMZM2G063643 N 0.847
mgf011994m Mimulus guttatus mgf011994m N 0.792
mgf005196m Mimulus guttatus mgf005196m N 0.893
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.880
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.747
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.903
Glyma14g38730.1 Glycine max Glyma14g38730.1 N 0.773
Glyma11g31530.1 Glycine max Glyma11g31530.1 N 0.824
Glyma09g40820.1 Glycine max Glyma09g40820.1 N 0.893
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.795
Glyma02g40440.1 Glycine max Glyma02g40440.1 N 0.773
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.861
Medtr3g083820 Medicago truncatula Medtr3g083820 N 0.827
PDK_20s1595621g003 Phoenix dactylifera PDK_20s1595621g003 N 0.865
MDP0000665847 Malus x domestica MDP0000665847 N 0.918
MDP0000501473 Malus x domestica MDP0000501473 N 0.917
MDP0000186494 Malus x domestica MDP0000186494 N 0.918
MDP0000119110 Malus x domestica MDP0000119110 N 0.917
LjT28H07.110.nc Lotus japonicus LjT28H07.110.nc N 0.893
LjSGA_139736.1.1 Lotus japonicus LjSGA_139736.1.1 N 0.713
chr3.CM0634.210.nc Lotus japonicus chr3.CM0634.210.nc N 0.829
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.917
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.917
Medtr7g080640 Medicago truncatula Medtr7g080640 N 0.882
Medtr5g083520 Medicago truncatula Medtr5g083520 N 0.734
Cucsa.177080 Cucumis sativus Cucsa.177080 N 0.905
Cucsa.130740 Cucumis sativus Cucsa.130740 N 0.880
LOC_Os01g60260 Oryza sativa LOC_Os01g60260 N 0.716
GSVIVG00024534001 Vitis vinifera GSVIVG00024534001 N 0.750
XM_002881558.1 Arabidopsis lyrata fgenesh2_kg.4__1930__AT2G38610.2 N 0.859
XM_002882529.1 Arabidopsis lyrata fgenesh2_kg.3__864__AT3G08620.1 N 0.800
BRADI2G22090 Brachypodium distachyon BRADI2G22090 N 0.714
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.753
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.747
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.716
BGIOSIBCE013438 Oryza indica BGIOSIBCE013438 N 0.819
AT3G08620 Arabidopsis thaliana AT3G08620-TAIR-G N 0.840
AT2G38610 Arabidopsis thaliana AT2G38610-TAIR-G N 0.859
PK23097.1 Cannabis sativa PK23097.1 N 0.931
LOC_Os03g60110 Oryza sativa LOC_Os03g60110 N 0.847
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.704
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.944
cassava38069.valid.m1 Manihot esculenta cassava38069.valid.m1 N 0.817
cassava25198.valid.m1 Manihot esculenta cassava25198.valid.m1 N 0.958
29945.m000086 Ricinus communis 29945.m000086 N 0.859
27955.m000377 Ricinus communis 27955.m000377 N 0.932
SB09G020640 Sorghum bicolor Sb09g020640 N 0.704
SB02G006770 Sorghum bicolor Sb02g006770 N 0.847
SB01G003680 Sorghum bicolor Sb01g003680 N 0.849
B9INJ7_POPTR Populus trichocarpa POPTR_0019s15270 N 0.859
POPTR_0016s14760 Populus trichocarpa POPTR_0016s14760 N 0.800
B9I777_POPTR Populus trichocarpa POPTR_0013s15580 N 0.803
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.920
PK22673.1 Cannabis sativa PK22673.1 N 0.827