THOC4 (Echinops telfairi)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSETEG00000016596 T36994_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000013465 RRM 29 98

Links

Other RRM family RBPs
Other Echinops telfairi RBPs

112 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Q6GLW1 Xenopus laevis Q6GLW1 N 0.971
GM10513 Drosophila sechellia FBgn0165460 N 0.786
GI23076 Drosophila mojavensis FBgn0145803 N 0.771
GH18594 Drosophila grimshawi FBgn0126061 N 0.771
GG10124 Drosophila erecta FBgn0102435 N 0.786
GF17326 Drosophila ananassae FBgn0094344 N 0.771
GA10707-RA Drosophila pseudoobscura FBgn0070763 N 0.800
aly Drosophila yakuba FBgn0068000 N 0.786
Aly Drosophila melanogaster FBgn0010774 N 0.786
thoc4 Xenopus tropicalis ENSXETG00000005391 N 1.000
THOC4 Tursiops truncatus ENSTTRG00000012275 N 1.000
THOC4 Takifugu rubripes ENSTRUG00000008828 N 0.886
ENSTRUG00000003051 Takifugu rubripes ENSTRUG00000003051 N 0.843
THOC4 Tetraodon nigroviridis ENSTNIG00000011595 N 0.957
ENSTBEG00000005834 Tupaia belangeri ENSTBEG00000005834 N 1.000
Thoc4 Rattus norvegicus ENSRNOG00000036687 N 1.000
GD19510 Drosophila simulans FBgn0191006 N 0.786
GJ22697 Drosophila virilis FBgn0209801 N 0.771
GK12741 Drosophila willistoni FBgn0214750 N 0.771
Q58EA2 Xenopus laevis Q58EA2 N 1.000
AAH92013 Xenopus laevis AAH92013 N 1.000
AAH74336 Xenopus laevis AAH74336 N 0.971
XP_782040.2 Strongylocentrotus purpuratus XP_782040.2 N 0.814
XP_001185635.1 Strongylocentrotus purpuratus XP_001185635.1 N 0.814
Smp_108820 Schistosoma mansoni Smp_108820 N 0.871
Ame_R000656 Ailuropoda melanoleuca Ame_R000656 N 1.000
BGIBMGA005323 Bombyx mori BGIBMGA005323 N 0.871
PASA_GEN_1400063 Daphnia pulex PASA_GEN_1400063 N 0.829
estExt_Genewise1.C_7200001 Capitella teleta estExt_Genewise1.C_7200001 N 0.786
e_gw.5.817.1 Branchiostoma floridae e_gw.5.817.1 N 0.871
e_gw.394.68.1 Branchiostoma floridae e_gw.394.68.1 N 0.871
Aqu1.225634 Amphimedon queenslandica Aqu1.225634 N 0.771
PHUM023420 Pediculus humanus PHUM023420 N 0.800
ISCW001860 Ixodes scapularis ISCW001860 N 0.857
THOC4 Pteropus vampyrus ENSPVAG00000017866 N 1.000
THOC4 Pan troglodytes ENSPTRG00000009774 N 1.000
LOC100055097 Equus caballus ENSECAG00000018754 N 1.000
tho4 Danio rerio ENSDARG00000077732 N 1.000
Q8MY63_CIOSA Ciona savignyi ENSCSAVG00000003324 N 0.771
THOC4 Cavia porcellus ENSCPOG00000013710 N 1.000
ENSCJAG00000021543 Callithrix jacchus ENSCJAG00000021543 N 0.914
ENSCING00000013568 Ciona intestinalis ENSCING00000013568 N 0.757
THOC4 Canis familiaris ENSCAFG00000005877 N 1.000
THOC4_BOVIN Bos taurus ENSBTAG00000008498 N 1.000
THOC4 Anolis carolinensis ENSACAG00000010526 N 1.000
CPIJ007834 Culex quinquefasciatus CPIJ007834 N 0.829
AGAP006733 Anopheles gambiae AGAP006733 N 0.829
AAEL015263 Aedes aegypti AAEL015263 N 0.829
AAEL005114 Aedes aegypti AAEL005114 N 0.829
nasonia_NCBI_hmm488134 Nasonia vitripennis nasonia_NCBI_hmm488134 N 0.786
amel4_ncbi_hmm10980 Apis mellifera amel4_ncbi_hmm10980 N 0.871
THOC4 Erinaceus europaeus ENSEEUG00000010164 N 0.929
THOC4 Homo sapiens ENSG00000183684 N 1.000
ENSPPYG00000008749 Pongo pygmaeus ENSPPYG00000008749 N 1.000
THOC4 Oryzias latipes ENSORLG00000012331 N 0.971
THOC4 Otolemur garnettii ENSOGAG00000012409 N 1.000
Refbp2 Mus musculus ENSMUSG00000060244 N 0.943
Thoc4 Mus musculus ENSMUSG00000025134 N 1.000
THOC4 Monodelphis domestica ENSMODG00000003030 N 1.000
THOC4 Macaca mulatta ENSMMUG00000012884 N 1.000
ENSMLUG00000009555 Myotis lucifugus ENSMLUG00000009555 N 0.929
THOC4 Microcebus murinus ENSMICG00000017403 N 1.000
ENSMGAG00000005389 Meleagris gallopavo ENSMGAG00000005389 N 1.000
THOC4 Loxodonta africana ENSLAFG00000003083 N 1.000
THOC4 Gorilla gorilla ENSGGOG00000013935 N 1.000
THOC4 Gallus gallus ENSGALG00000007237 N 1.000
ENSGACG00000018178 Gasterosteus aculeatus ENSGACG00000018178 N 0.871
THOC4 Gasterosteus aculeatus ENSGACG00000013328 N 0.943
CpipJ_CPIJ007834 Culex pipiens CpipJ_CPIJ007834 N 0.829