GRMZM2G102829 (Zea mays)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GRMZM2G102829 T54110_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G102829_P01 RRM 37 107
GRMZM2G102829_P01 RRM 125 194
GRMZM2G102829_P01 RRM 216 285
GRMZM2G102829_P01 RRM 319 388
GRMZM2G102829_P02 RRM 37 107
GRMZM2G102829_P02 RRM 125 194
GRMZM2G102829_P02 RRM 216 285
GRMZM2G102829_P02 RRM 319 388
GRMZM2G102829_P03 RRM 37 107
GRMZM2G102829_P03 RRM 125 194
GRMZM2G102829_P03 RRM 216 281

Links

Other RRM family RBPs
Other Zea mays RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa002620m Prunus persica ppa002620m N 0.726
gw1.0.426.1 Selaginella moellendorfii gw1.0.426.1 N 0.708
Glyma17g35890.1 Glycine max Glyma17g35890.1 N 0.719
Glyma14g09300.1 Glycine max Glyma14g09300.1 N 0.726
Glyma07g33860.1 Glycine max Glyma07g33860.1 N 0.730
Glyma02g11580.1 Glycine max Glyma02g11580.1 N 0.719
estExt_Genewise1.C_1260120 Physcomitrella patens estExt_Genewise1.C_1260120 N 0.751
estExt_fgenesh1_pm.C_2810008 Physcomitrella patens estExt_fgenesh1_pm.C_2810008 N 0.740
estExt_fgenesh1_pg.C_2570045 Physcomitrella patens estExt_fgenesh1_pg.C_2570045 N 0.730
mgf004973m Mimulus guttatus mgf004973m N 0.719
mgf009542m Mimulus guttatus mgf009542m N 0.733
ppa002618m Prunus persica ppa002618m N 0.726
ppa002607m Prunus persica ppa002607m N 0.712
MDP0000283985 Malus x domestica MDP0000283985 N 0.701
Medtr4g130250 Medicago truncatula Medtr4g130250 N 0.719
Medtr3g147440 Medicago truncatula Medtr3g147440 N 0.726
Medtr1g024150 Medicago truncatula Medtr1g024150 N 0.719
GRMZM2G352129 Zea mays GRMZM2G352129 N 0.701
e_gw1.51.213.1 Physcomitrella patens e_gw1.51.213.1 N 0.744
e_gw1.24.89.1 Selaginella moellendorfii e_gw1.24.89.1 N 0.701
Cucsa.244510 Cucumis sativus Cucsa.244510 N 0.708
LOC_Os09g02700 Oryza sativa LOC_Os09g02700 N 0.833
LOC_Os08g22354 Oryza sativa LOC_Os08g22354 N 0.791
GSVIVG00022079001 Vitis vinifera GSVIVG00022079001 N 0.726
GSVIVG00009455001 Vitis vinifera GSVIVG00009455001 N 0.740
BRADI4G08430 Brachypodium distachyon BRADI4G08430 N 0.804
BRADI3G20460 Brachypodium distachyon BRADI3G20460 N 0.780
BGIOSIBCE029001 Oryza indica BGIOSIBCE029001 N 0.833
BGIOSIBCE027387 Oryza indica BGIOSIBCE027387 N 0.791
A9PEX9_POPTR Populus trichocarpa POPTR_0001s31160 N 0.722
POPTR_0002s12570 Populus trichocarpa POPTR_0002s12570 N 0.701
cassava6947.valid.m1 Manihot esculenta cassava6947.valid.m1 N 0.708
cassava17495.valid.m1 Manihot esculenta cassava17495.valid.m1 N 0.719
cassava12359.valid.m1 Manihot esculenta cassava12359.valid.m1 N 0.733
30170.m013847 Ricinus communis 30170.m013847 N 0.719
29801.m003152 Ricinus communis 29801.m003152 N 0.712
Sb02g017910 Sorghum bicolor Sb02g017910 N 0.975
B9GNU4_POPTR Populus trichocarpa POPTR_0014s02550 N 0.705
B9HS30_POPTR Populus trichocarpa POPTR_0009s10220 N 0.719
PK02172.1 Cannabis sativa PK02172.1 N 0.701