HNRNPM (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000010802 T35578_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000020043 RRM 5 39
ENSCJAP00000020043 RRM 102 171
ENSCJAP00000020043 RRM 536 604
ENSCJAP00000020089 RRM 73 143
ENSCJAP00000020089 RRM 206 275
ENSCJAP00000020089 RRM 655 723
ENSCJAP00000020100 RRM 73 143
ENSCJAP00000020100 RRM 206 275
ENSCJAP00000020100 RRM 655 723
ENSCJAP00000020107 RRM 73 143
ENSCJAP00000020107 RRM 167 236
ENSCJAP00000020107 RRM 616 684
ENSCJAP00000046566 RRM 72 142
ENSCJAP00000046566 RRM 205 274
ENSCJAP00000046566 RRM 654 722

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

77 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A6QQP0_BOVIN Bos taurus ENSBTAG00000008771 N 0.768
AAI08588 Xenopus laevis AAI08588 N 0.739
AAI34826 Xenopus laevis AAI34826 N 0.862
Ame_R005511 Ailuropoda melanoleuca Ame_R005511 N 0.768
Ame_R017061 Ailuropoda melanoleuca Ame_R017061 N 0.995
ENSBTAG00000039263 Bos taurus ENSBTAG00000039263 N 0.787
ENSDORG00000015835 Dipodomys ordii ENSDORG00000015835 N 0.763
ENSMODG00000003473 Monodelphis domestica ENSMODG00000003473 N 0.714
ENSOCUG00000000552 Oryctolagus cuniculus ENSOCUG00000000552 N 0.995
ENSOCUG00000024611 Oryctolagus cuniculus ENSOCUG00000024611 N 0.995
ENSPPYG00000006452 Pongo pygmaeus ENSPPYG00000006452 N 0.768
ENSPPYG00000009506 Pongo pygmaeus ENSPPYG00000009506 N 0.995
ENSRNOG00000024645 Rattus norvegicus ENSRNOG00000024645 N 0.852
HNRNPM Tetraodon nigroviridis ENSTNIG00000015530 N 0.782
HNRNPM Myotis lucifugus ENSMLUG00000006696 N 0.990
HNRNPM Microcebus murinus ENSMICG00000002532 N 0.971
HNRNPM Pan troglodytes ENSPTRG00000010424 N 0.995
HNRNPM Takifugu rubripes ENSTRUG00000013783 N 0.791
HNRNPM Meleagris gallopavo ENSMGAG00000000700 N 0.943
HNRNPM Tupaia belangeri ENSTBEG00000008718 N 0.976
Hnrnpm Mus musculus ENSMUSG00000059208 N 0.990
HNRNPM Spermophilus tridecemlineatus ENSSTOG00000008112 N 0.924
HNRNPM Otolemur garnettii ENSOGAG00000003234 N 0.884
HNRNPM Sus scrofa ENSSSCG00000013602 N 0.995
HNRNPM Ochotona princeps ENSOPRG00000001943 N 0.943
HNRNPM Sorex araneus ENSSARG00000000267 N 0.962
HNRNPM Procavia capensis ENSPCAG00000009678 N 0.976
HNRNPM Macropus eugenii ENSMEUG00000004789 N 0.915
HNRNPM Loxodonta africana ENSLAFG00000013603 N 0.995
HNRNPM Felis catus ENSFCAG00000015218 N 0.891
HNRNPM Echinops telfairi ENSETEG00000019712 N 0.995
HNRNPM Equus caballus ENSECAG00000023868 N 0.995
HNRNPM Dasypus novemcinctus ENSDNOG00000012157 N 0.924
HNRNPM Cavia porcellus ENSCPOG00000015182 N 0.990
HNRNPM Oryzias latipes ENSORLG00000005400 N 0.810
HNRNPM Choloepus hoffmanni ENSCHOG00000013627 N 0.995
HNRNPM Canis familiaris ENSCAFG00000018524 N 0.995
hnrnpm Xenopus tropicalis ENSXETG00000001777 N 0.805
HNRNPM Gasterosteus aculeatus ENSGACG00000010265 N 0.820
HNRNPM Gorilla gorilla ENSGGOG00000003498 N 0.995
HNRNPM Homo sapiens ENSG00000099783 N 0.995
HNRNPM Tursiops truncatus ENSTTRG00000009769 N 0.995
HNRNPM Macaca mulatta ENSMMUG00000018806 N 0.995
Hnrpm Rattus norvegicus ENSRNOG00000007921 N 0.995
LOC100070256 Equus caballus ENSECAG00000005741 N 0.768
MYEF2 Tetraodon nigroviridis ENSTNIG00000009526 N 0.741
MYEF2 Sus scrofa ENSSSCG00000004661 N 0.768
MYEF2 Takifugu rubripes ENSTRUG00000016967 N 0.724
MYEF2 Tarsius syrichta ENSTSYG00000010575 N 0.706
myef2 Xenopus tropicalis ENSXETG00000018412 N 0.749
MYEF2 Tursiops truncatus ENSTTRG00000008076 N 0.768
MYEF2 Taeniopygia guttata ENSTGUG00000007130 N 0.763
MYEF2 Vicugna pacos ENSVPAG00000004721 N 0.768
Myef2 Rattus norvegicus ENSRNOG00000005258 N 0.773
MYEF2 Pan troglodytes ENSPTRG00000007042 N 0.768
MYEF2 Loxodonta africana ENSLAFG00000012990 N 0.773
MYEF2 Gorilla gorilla ENSGGOG00000014968 N 0.768
MYEF2 Gasterosteus aculeatus ENSGACG00000016759 N 0.739
MYEF2 Homo sapiens ENSG00000104177 N 0.768
MYEF2 Anolis carolinensis ENSACAG00000004806 N 0.754
myef2 Danio rerio ENSDARG00000059398 N 0.735
MYEF2 Callithrix jacchus ENSCJAG00000001875 N 0.768
MYEF2 Canis familiaris ENSCAFG00000014008 N 0.768
MYEF2 Meleagris gallopavo ENSMGAG00000006915 N 0.768
MYEF2 Macaca mulatta ENSMMUG00000018834 N 0.768
MYEF2 Procavia capensis ENSPCAG00000016660 N 0.768
Myef2 Mus musculus ENSMUSG00000027201 N 0.768
MYEF2 Oryzias latipes ENSORLG00000002730 N 0.730
MYEF2 Otolemur garnettii ENSOGAG00000010907 N 0.706
MYEF2 Oryctolagus cuniculus ENSOCUG00000013043 N 0.768
MYEF2 Cavia porcellus ENSCPOG00000010584 N 0.722
MYEF2 Monodelphis domestica ENSMODG00000002744 N 0.711
Q3SYX2_BOVIN Bos taurus ENSBTAG00000021039 N 0.995
Q5ZHY2_CHICK Gallus gallus ENSGALG00000004905 N 0.768
Q5ZL80_CHICK Gallus gallus ENSGALG00000000377 N 0.957
XM_001365870.1 Monodelphis domestica ENSMODG00000003801 N 0.986