estExt_fgenesh1_kg.C_130002 (Sporobolomyces roseus)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 estExt_fgenesh1_kg.C_130002 T61072_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
eIF-2alpha
M231_0.6 		Drosophila melanogaster WGCAUG RNAcompete
Ray et al.(2013)
RNCMPT00273 		0.789
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_kg.C_130002 S1 9 83

Links

Other S1 family RBPs
Other Sporobolomyces roseus RBPs

267 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSACAG00000016470 Anolis carolinensis ENSACAG00000016470 I 0.000
ENSCAFG00000000567 Canis familiaris ENSCAFG00000000567 I 0.000
ENSLAFG00000013994 Loxodonta africana ENSLAFG00000013994 I 0.000
ENSOANG00000007307 Ornithorhynchus anatinus ENSOANG00000007307 I 0.000
ENSOCUG00000004354 Oryctolagus cuniculus ENSOCUG00000004354 I 0.000
ENSOCUG00000023935 Oryctolagus cuniculus ENSOCUG00000023935 I 0.000
ENSOPRG00000009667 Ochotona princeps ENSOPRG00000009667 I 0.000
ENSPPYG00000018790 Pongo pygmaeus ENSPPYG00000018790 I 0.000
ENSPVAG00000016640 Pteropus vampyrus ENSPVAG00000016640 I 0.000
ENSSSCG00000006063 Sus scrofa ENSSSCG00000006063 I 0.000
ENSTTRG00000004689 Tursiops truncatus ENSTTRG00000004689 I 0.000
LOC100413032 Callithrix jacchus ENSCJAG00000015833 I 0.000
PABPC1 Homo sapiens ENSG00000070756 D 0.000
PABPC1 Macaca mulatta ENSMMUG00000017786 I 0.000
Pabpc1 Rattus norvegicus ENSRNOG00000008639 I 0.000
Pabpc1 Mus musculus ENSMUSG00000022283 I 0.000
PABPC1 Taeniopygia guttata ENSTGUG00000012067 I 0.000
PABPC3 Oryzias latipes ENSORLG00000002691 I 0.000
XR_023909.1 Pan troglodytes ENSPTRG00000020475 I 0.000
XR_030308.1 Monodelphis domestica ENSMODG00000006222 I 0.000