RBM27 (Callithrix jacchus)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		ENSCJAG00000021308 T00470_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000039668 CCCH ZF 274 300
ENSCJAP00000039668 RRM 578 643
ENSCJAP00000039669 CCCH ZF 274 300
ENSCJAP00000039669 RRM 605 670

Links

Other CCCH ZF,RRM family RBPs
Other Callithrix jacchus RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002882506.1 Arabidopsis lyrata fgenesh2_kg.3__820__AT3G07810.2 N 0.000
AT3G07810 Arabidopsis thaliana AT3G07810-TAIR-G N 0.000
BRADI4G12200 Brachypodium distachyon BRADI4G12200 N 0.000
PK13457.1 Cannabis sativa PK13457.1 N 0.000
PK25912.1 Cannabis sativa PK25912.1 N 0.000
Cucsa.042370 Cucumis sativus Cucsa.042370 N 0.000
Glyma02g47690.1 Glycine max Glyma02g47690.1 N 0.000
Glyma14g00970.1 Glycine max Glyma14g00970.1 N 0.000
chr6.LjT16B20.40.nc Lotus japonicus chr6.LjT16B20.40.nc N 0.000
MDP0000320618 Malus x domestica MDP0000320618 N 0.000
MDP0000642684 Malus x domestica MDP0000642684 N 0.000
MDP0000907782 Malus x domestica MDP0000907782 N 0.000
cassava865.valid.m1 Manihot esculenta cassava865.valid.m1 N 0.000
cassava31392.valid.m1 Manihot esculenta cassava31392.valid.m1 N 0.000
cassava23136.valid.m1 Manihot esculenta cassava23136.valid.m1 N 0.000
cassava12078.valid.m1 Manihot esculenta cassava12078.valid.m1 N 0.000
cassava12077.valid.m1 Manihot esculenta cassava12077.valid.m1 N 0.000
Medtr5g105300 Medicago truncatula Medtr5g105300 N 0.000
Medtr2g030270 Medicago truncatula Medtr2g030270 N 0.000
mgf009385m Mimulus guttatus mgf009385m N 0.000
mgf012147m Mimulus guttatus mgf012147m N 0.000
LOC_Os11g41890 Oryza sativa LOC_Os11g41890 N 0.000
B9IAN1_POPTR Populus trichocarpa POPTR_0014s15970 N 0.000
B9I165_POPTR Populus trichocarpa POPTR_0011s09050 N 0.000
POPTR_0016s01150 Populus trichocarpa POPTR_0016s01150 N 0.000
B9GTG8_POPTR Populus trichocarpa POPTR_0002s22120 N 0.000
B9GJW8_POPTR Populus trichocarpa POPTR_0001s37230 N 0.000
B9HCV4_POPTR Populus trichocarpa POPTR_0006s01680 N 0.000
ppa005119m Prunus persica ppa005119m N 0.000
ppa005132m Prunus persica ppa005132m N 0.000
27613.m000635 Ricinus communis 27613.m000635 N 0.000
29608.m000212 Ricinus communis 29608.m000212 N 0.000
30048.m000319 Ricinus communis 30048.m000319 N 0.000
GSVIVG00037771001 Vitis vinifera GSVIVG00037771001 N 0.000
GSVIVG00030040001 Vitis vinifera GSVIVG00030040001 N 0.000