PDK_20s1595621g003 (Phoenix dactylifera)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 PDK_20s1595621g003 T21949_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1595621g003 KH 140 212

Links

Other KH family RBPs
Other Phoenix dactylifera RBPs

62 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002882529.1 Arabidopsis lyrata fgenesh2_kg.3__864__AT3G08620.1 N 0.811
XM_002881558.1 Arabidopsis lyrata fgenesh2_kg.4__1930__AT2G38610.2 N 0.782
AT2G38610 Arabidopsis thaliana AT2G38610-TAIR-G N 0.782
AT3G08620 Arabidopsis thaliana AT3G08620-TAIR-G N 0.838
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.714
BRADI2G22090 Brachypodium distachyon BRADI2G22090 N 0.762
PK22673.1 Cannabis sativa PK22673.1 N 0.892
PK23097.1 Cannabis sativa PK23097.1 N 0.892
Cucsa.130740 Cucumis sativus Cucsa.130740 N 0.880
Cucsa.177080 Cucumis sativus Cucsa.177080 N 0.851
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.892
Glyma02g40440.1 Glycine max Glyma02g40440.1 N 0.851
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.795
Glyma09g40820.1 Glycine max Glyma09g40820.1 N 0.893
Glyma11g31530.1 Glycine max Glyma11g31530.1 N 0.865
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.907
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.783
Glyma14g38730.1 Glycine max Glyma14g38730.1 N 0.851
LjT28H07.110.nc Lotus japonicus LjT28H07.110.nc N 0.907
chr3.CM0634.210.nc Lotus japonicus chr3.CM0634.210.nc N 0.816
MDP0000665847 Malus x domestica MDP0000665847 N 0.905
MDP0000501473 Malus x domestica MDP0000501473 N 0.878
MDP0000268130 Malus x domestica MDP0000268130 N 0.712
MDP0000186494 Malus x domestica MDP0000186494 N 0.905
MDP0000119110 Malus x domestica MDP0000119110 N 0.878
MDP0000077753 Malus x domestica MDP0000077753 N 0.712
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.905
cassava25198.valid.m1 Manihot esculenta cassava25198.valid.m1 N 0.865
cassava38069.valid.m1 Manihot esculenta cassava38069.valid.m1 N 0.836
Medtr7g080640 Medicago truncatula Medtr7g080640 N 0.855
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.878
Medtr3g083820 Medicago truncatula Medtr3g083820 N 0.865
Medtr5g083520 Medicago truncatula Medtr5g083520 N 0.720
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.878
mgf011994m Mimulus guttatus mgf011994m N 0.787
mgf005196m Mimulus guttatus mgf005196m N 0.840
BGIOSIBCE013438 Oryza indica BGIOSIBCE013438 N 0.808
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.714
BGIOSIBCE019437 Oryza indica BGIOSIBCE019437 N 0.729
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.702
LOC_Os05g40290 Oryza sativa LOC_Os05g40290 N 0.729
LOC_Os01g60260 Oryza sativa LOC_Os01g60260 N 0.714
LOC_Os03g60110 Oryza sativa LOC_Os03g60110 N 0.836
B9I777_POPTR Populus trichocarpa POPTR_0013s15580 N 0.795
POPTR_0016s14760 Populus trichocarpa POPTR_0016s14760 N 0.776
B9INJ7_POPTR Populus trichocarpa POPTR_0019s15270 N 0.863
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.893
POPTR_0001s47500 Populus trichocarpa POPTR_0001s47500 N 0.705
ppa009701m Prunus persica ppa009701m N 0.893
27955.m000377 Ricinus communis 27955.m000377 N 0.892
29945.m000086 Ricinus communis 29945.m000086 N 0.836
SB09G023640 Sorghum bicolor Sb09g023640 N 0.735
SB01G003680 Sorghum bicolor Sb01g003680 N 0.813
SB02G006770 Sorghum bicolor Sb02g006770 N 0.813
SB03G038070 Sorghum bicolor Sb03g038070 N 0.706
GSVIVG00024534001 Vitis vinifera GSVIVG00024534001 N 0.733
GSVIVG00029865001 Vitis vinifera GSVIVG00029865001 N 0.865
GRMZM2G063643 Zea mays GRMZM2G063643 N 0.773
GRMZM2G122569 Zea mays GRMZM2G122569 N 0.735
GRMZM2G108677 Zea mays GRMZM2G108677 N 0.800
GRMZM2G085582 Zea mays GRMZM2G085582 N 0.747
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.813