CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FOXG_15630
(
Fusarium oxysporum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FOXG_15630
T29327_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FOXG_15630T0
RRM
232
297
LFVTGIEDDLPEYKLRDFFKVHGKIKSLVCSHMSHCAFVNYETREAAEKAAEACQGRAVIAGCPLR
Links
Other
RRM
family RBPs
Other
Fusarium oxysporum
RBPs
21 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R004727
Ailuropoda melanoleuca
Ame_R004727
I
0.000
IGF2BP1
Anolis carolinensis
ENSACAG00000006199
I
0.000
IGF2BP3
Anolis carolinensis
ENSACAG00000013538
I
0.000
IGF2BP1
Bos taurus
ENSBTAG00000011736
I
0.000
IGF2BP3
Callithrix jacchus
ENSCJAG00000001499
I
0.000
LOC100395821
Callithrix jacchus
ENSCJAG00000007258
I
0.000
IGF2BP1
Canis familiaris
ENSCAFG00000016907
I
0.000
IGF2BP1
Cavia porcellus
ENSCPOG00000020174
I
0.000
IGF2BP3
Choloepus hoffmanni
ENSCHOG00000002341
I
0.000
igf2bp2a
Danio rerio
ENSDARG00000003421
I
0.000
igf2bp3
Danio rerio
ENSDARG00000010266
I
0.000
igf2bp1
Danio rerio
ENSDARG00000061478
I
0.000
IGF2BP1
Dasypus novemcinctus
ENSDNOG00000006801
N
0.000
Igf2bp3
Dipodomys ordii
ENSDORG00000014185
I
0.000
Igf2bp1
Dipodomys ordii
ENSDORG00000014371
I
0.000
IGF2BP1
Equus caballus
ENSECAG00000009723
I
0.000
IGF2BP1
Felis catus
ENSFCAG00000002454
N
0.000
IF2B3_CHICK
Gallus gallus
ENSGALG00000010961
I
0.000
LOC424865
Gallus gallus
ENSGALG00000006523
I
0.000
IF2B1_CHICK
Gallus gallus
ENSGALG00000001293
I
0.000
IGF2BP2
Gasterosteus aculeatus
ENSGACG00000005991
I
0.000
IGF2BP1
Gasterosteus aculeatus
ENSGACG00000005318
I
0.000
IGF2BP1
Gorilla gorilla
ENSGGOG00000008872
I
0.000
IGF2BP2
Homo sapiens
ENSG00000073792
D
0.000
IGF2BP3
Homo sapiens
ENSG00000136231
D
0.000
IGF2BP1
Loxodonta africana
ENSLAFG00000002048
I
0.000
IGF2BP2
Macaca mulatta
ENSMMUG00000023416
I
0.000
IGF2BP3
Macaca mulatta
ENSMMUG00000004839
I
0.000
IGF2BP1
Macaca mulatta
ENSMMUG00000011533
I
0.000
IGF2BP3
Microcebus murinus
ENSMICG00000013683
I
0.000
IGF2BP1
Microcebus murinus
ENSMICG00000013324
I
0.000
IGF2BP3
Monodelphis domestica
ENSMODG00000001014
I
0.000
IGF2BP1
Monodelphis domestica
ENSMODG00000012268
I
0.000
Igf2bp1
Mus musculus
ENSMUSG00000013415
I
0.000
Igf2bp3
Mus musculus
ENSMUSG00000029814
I
0.000
Igf2bp2
Mus musculus
ENSMUSG00000033581
I
0.000
IGF2BP3
Ornithorhynchus anatinus
ENSOANG00000014203
I
0.000
IGF2BP2
Oryctolagus cuniculus
ENSOCUG00000005057
I
0.000
IGF2BP1
Oryctolagus cuniculus
ENSOCUG00000004411
I
0.000
IGF2BP3
Oryzias latipes
ENSORLG00000004712
I
0.000
IGF2BP2
Oryzias latipes
ENSORLG00000016532
I
0.000
IGF2BP1
Otolemur garnettii
ENSOGAG00000001270
I
0.000
IGF2BP1
Pan troglodytes
ENSPTRG00000009368
I
0.000
XR_025001.1
Pan troglodytes
ENSPTRG00000015705
I
0.000
XR_022832.1
Pan troglodytes
ENSPTRG00000018986
I
0.000
ENSPPYG00000008913
Pongo pygmaeus
ENSPPYG00000008913
I
0.000
ENSPPYG00000017730
Pongo pygmaeus
ENSPPYG00000017730
I
0.000
IGF2BP1
Procavia capensis
ENSPCAG00000016601
N
0.000
IGF2BP1
Pteropus vampyrus
ENSPVAG00000001718
I
0.000
Igf2bp1
Rattus norvegicus
ENSRNOG00000006122
I
0.000
D3ZB84_RAT
Rattus norvegicus
ENSRNOG00000009052
I
0.000
Igf2bp2
Rattus norvegicus
ENSRNOG00000025946
I
0.000
IGF2BP1
Spermophilus tridecemlineatus
ENSSTOG00000010643
N
0.000
IGF2BP3
Taeniopygia guttata
ENSTGUG00000002773
I
0.000
IGF2BP2
Takifugu rubripes
ENSTRUG00000009908
I
0.000
IGF2BP3
Takifugu rubripes
ENSTRUG00000006094
I
0.000
IGF2BP1
Tarsius syrichta
ENSTSYG00000003912
I
0.000
IGF2BP3
Tetraodon nigroviridis
ENSTNIG00000017755
I
0.000
IGF2BP2
Tetraodon nigroviridis
ENSTNIG00000016472
I
0.000
IGF2BP1
Tetraodon nigroviridis
ENSTNIG00000013986
I
0.000
IGF2BP1
Tursiops truncatus
ENSTTRG00000007197
I
0.000
IGF2BP3
Tursiops truncatus
ENSTTRG00000008921
I
0.000
AAI70224
Xenopus laevis
AAI70224
I
0.000
AAI70477
Xenopus laevis
AAI70477
I
0.000
AAI70479
Xenopus laevis
AAI70479
I
0.000
O57526
Xenopus laevis
O57526
I
0.000
AAI70196
Xenopus laevis
AAI70196
I
0.000
AAH57700
Xenopus laevis
AAH57700
I
0.000
AAC41285
Xenopus laevis
AAC41285
I
0.000
AAC18598
Xenopus laevis
AAC18598
I
0.000
AAC18597
Xenopus laevis
AAC18597
I
0.000
AAB97457
Xenopus laevis
AAB97457
I
0.000
O73932
Xenopus laevis
O73932
I
0.000
igf2bp3
Xenopus tropicalis
ENSXETG00000007396
I
0.000