unc-75 (Caenorhabditis elegans)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 C17D12.2 T33331_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
unc-75
M079_0.6		 Caenorhabditis elegans UGUUGUD RNAcompete
Ray et al.(2013)
RNCMPT00081 		(Direct)

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.758
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.720
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M079_0.6 RRM 31 100
M079_0.6 RRM 126 194
M079_0.6 RRM 431 501

RNA Binding Domains

Protein ID Domain From To Sequence
C17D12.2 RRM 31 100
C17D12.2 RRM 126 194
C17D12.2 RRM 431 501

Links

Other RRM family RBPs
Other Caenorhabditis elegans RBPs

59 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.000
PCBP3 Homo sapiens ENSG00000183570 I 0.000
ENSMGAG00000005386 Meleagris gallopavo ENSMGAG00000005386 N 0.000
XR_030450.1 Monodelphis domestica ENSMODG00000016543 N 0.000
ENSMODG00000017748 Monodelphis domestica ENSMODG00000017748 I 0.000
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.000
PCBP1 Tarsius syrichta ENSTSYG00000011282 N 0.000
PCBP1 Tupaia belangeri ENSTBEG00000015706 N 0.000