unc-75 (Caenorhabditis elegans)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 C17D12.2 T33331_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
unc-75
M079_0.6		 Caenorhabditis elegans UGUUGUD RNAcompete
Ray et al.(2013)
RNCMPT00081 		(Direct)

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.758
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.720
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M079_0.6 RRM 31 100
M079_0.6 RRM 126 194
M079_0.6 RRM 431 501

RNA Binding Domains

Protein ID Domain From To Sequence
C17D12.2 RRM 31 100
C17D12.2 RRM 126 194
C17D12.2 RRM 431 501

Links

Other RRM family RBPs
Other Caenorhabditis elegans RBPs

59 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R011948 Ailuropoda melanoleuca Ame_R011948 I 0.758
Ame_R007421 Ailuropoda melanoleuca Ame_R007421 I 0.716
Ame_R007822 Ailuropoda melanoleuca Ame_R007822 I 0.720
CELF6 Bos taurus ENSBTAG00000014092 I 0.720
CELF3_BOVIN Bos taurus ENSBTAG00000019131 I 0.716
Bm1_27610 Brugia malayi Bm1_27610 I 0.848
CBG15358 Caenorhabditis briggsae CBG15358 I 0.952
CRE09771 Caenorhabditis remanei CRE09771 I 0.952
CELF3 Callithrix jacchus ENSCJAG00000007857 I 0.716
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.720
CELF3 Canis familiaris ENSCAFG00000012794 I 0.716
estExt_Genewise1Plus.C_6380019 Capitella teleta estExt_Genewise1Plus.C_6380019 I 0.744
CELF3 Cavia porcellus ENSCPOG00000003539 I 0.716
CELF3 Danio rerio ENSDARG00000006983 I 0.710
celf5 Danio rerio ENSDARG00000071375 I 0.744
celf3 Danio rerio ENSDARG00000034668 I 0.739
CELF3 Equus caballus ENSECAG00000020365 I 0.716
CELF6 Felis catus ENSFCAG00000016249 I 0.720
CELF3 Gasterosteus aculeatus ENSGACG00000003274 I 0.725
CELF3 Gasterosteus aculeatus ENSGACG00000011707 I 0.744
ENSGGOG00000021973 Gorilla gorilla ENSGGOG00000021973 I 0.716
CELF6 Gorilla gorilla ENSGGOG00000015463 I 0.720
BRUNOL5 Homo sapiens ENSG00000161082 D 0.758
BRUNOL6 Homo sapiens ENSG00000140488 D 0.720
CELF3 Homo sapiens ENSG00000159409 I 0.716
CELF6 Loxodonta africana ENSLAFG00000020985 I 0.712
CELF3 Loxodonta africana ENSLAFG00000030147 I 0.716
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.754
HEXA Macaca mulatta ENSMMUG00000010687 I 0.720
CELF6 Meleagris gallopavo ENSMGAG00000001804 I 0.719
CELF3 Monodelphis domestica ENSMODG00000018897 I 0.716
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.739
Celf6 Mus musculus ENSMUSG00000032297 I 0.725
Celf3 Mus musculus ENSMUSG00000028137 I 0.716
Celf4 Mus musculus ENSMUSG00000024268 I 0.749
B7NZE2_RABIT Oryctolagus cuniculus ENSOCUG00000003551 I 0.716
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.754
CELF5 Oryzias latipes ENSORLG00000004600 I 0.739
CELF4 Oryzias latipes ENSORLG00000008913 I 0.758
CELF5 Pan troglodytes ENSPTRG00000010259 I 0.735
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.720
CELF3 Pan troglodytes ENSPTRG00000001293 I 0.716
ENSPPYG00000006615 Pongo pygmaeus ENSPPYG00000006615 I 0.716
CELF6 Pteropus vampyrus ENSPVAG00000006406 I 0.720
Brunol6 Rattus norvegicus ENSRNOG00000010817 I 0.725
D4A916_RAT Rattus norvegicus ENSRNOG00000020875 I 0.716
CELF6 Sus scrofa ENSSSCG00000001928 I 0.720
CELF3 Takifugu rubripes ENSTRUG00000014225 I 0.735
CELF4 Takifugu rubripes ENSTRUG00000015481 I 0.735
CELF3 Tetraodon nigroviridis ENSTNIG00000008062 I 0.744
Q91579 Xenopus laevis Q91579 I 0.720
Q7ZWM3 Xenopus laevis Q7ZWM3 I 0.720
ACH69785 Xenopus laevis ACH69785 I 0.763
AAH72134 Xenopus laevis AAH72134 I 0.720
AAH57704 Xenopus laevis AAH57704 I 0.720
AAH46942 Xenopus laevis AAH46942 I 0.720
AAA81375 Xenopus laevis AAA81375 I 0.720
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.758
celf4 Xenopus tropicalis ENSXETG00000020486 I 0.758