CELF6 (Meleagris gallopavo)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMGAG00000001804 T38320_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.814
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.810
BRUNOL4
M004_0.6 		Homo sapiens KGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00004 		0.748
unc-75
M079_0.6 		Caenorhabditis elegans UGUUGUD RNAcompete
Ray et al.(2013)
RNCMPT00081 		0.719
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMGAP00000001323 RRM 9 77
ENSMGAP00000001323 RRM 104 161
ENSMGAP00000001323 RRM 358 428

Links

Other RRM family RBPs
Other Meleagris gallopavo RBPs

76 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
celf4 Xenopus tropicalis ENSXETG00000020486 I 0.857
CELF3 Takifugu rubripes ENSTRUG00000014225 I 0.856
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.852
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.852
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.852
CELF4 Oryzias latipes ENSORLG00000008913 I 0.848
Celf4 Mus musculus ENSMUSG00000024268 I 0.848
CELF4 Takifugu rubripes ENSTRUG00000015481 I 0.824
CELF3 Tetraodon nigroviridis ENSTNIG00000008062 I 0.819
CELF3 Gasterosteus aculeatus ENSGACG00000011707 I 0.819
Brunol6 Rattus norvegicus ENSRNOG00000010817 I 0.814
CELF6 Pteropus vampyrus ENSPVAG00000006406 I 0.814
CELF6 Bos taurus ENSBTAG00000014092 I 0.814
CELF6 Sus scrofa ENSSSCG00000001928 I 0.814
Ame_R007822 Ailuropoda melanoleuca Ame_R007822 I 0.814
Ame_R011948 Ailuropoda melanoleuca Ame_R011948 I 0.814
CELF6 Felis catus ENSFCAG00000016249 I 0.814
celf5 Danio rerio ENSDARG00000071375 I 0.814
Celf6 Mus musculus ENSMUSG00000032297 I 0.814
BRUNOL5 Homo sapiens ENSG00000161082 D 0.814
celf3 Danio rerio ENSDARG00000034668 I 0.810
BRUNOL6 Homo sapiens ENSG00000140488 D 0.810
CELF6 Gorilla gorilla ENSGGOG00000015463 I 0.810
HEXA Macaca mulatta ENSMMUG00000010687 I 0.810
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.809
ACH69785 Xenopus laevis ACH69785 I 0.805
ENSPPYG00000006615 Pongo pygmaeus ENSPPYG00000006615 I 0.805
CELF5 Oryzias latipes ENSORLG00000004600 I 0.805
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.805
CELF6 Loxodonta africana ENSLAFG00000020985 I 0.802
estExt_Genewise1Plus.C_6380019 Capitella teleta estExt_Genewise1Plus.C_6380019 I 0.800
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.795
AAH72134 Xenopus laevis AAH72134 I 0.795
AAA81375 Xenopus laevis AAA81375 I 0.795
AAH57704 Xenopus laevis AAH57704 I 0.795
CELF3 Gasterosteus aculeatus ENSGACG00000003274 I 0.795
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.795
Q91579 Xenopus laevis Q91579 I 0.795
CELF5 Pan troglodytes ENSPTRG00000010259 I 0.790
Q7ZWM3 Xenopus laevis Q7ZWM3 I 0.786
AAH46942 Xenopus laevis AAH46942 I 0.786
CELF3 Canis familiaris ENSCAFG00000012794 I 0.781
CELF3_BOVIN Bos taurus ENSBTAG00000019131 I 0.781
CELF3 Cavia porcellus ENSCPOG00000003539 I 0.781
ENSGGOG00000021973 Gorilla gorilla ENSGGOG00000021973 I 0.781
CELF3 Callithrix jacchus ENSCJAG00000007857 I 0.781
CELF3 Homo sapiens ENSG00000159409 I 0.781
CELF3 Equus caballus ENSECAG00000020365 I 0.781
CELF3 Loxodonta africana ENSLAFG00000030147 I 0.781
CELF3 Pan troglodytes ENSPTRG00000001293 I 0.781
D4A916_RAT Rattus norvegicus ENSRNOG00000020875 I 0.781
B7NZE2_RABIT Oryctolagus cuniculus ENSOCUG00000003551 I 0.781
Ame_R007421 Ailuropoda melanoleuca Ame_R007421 I 0.781
CELF3 Monodelphis domestica ENSMODG00000018897 I 0.781
Celf3 Mus musculus ENSMUSG00000028137 I 0.781
CELF3 Oryzias latipes ENSORLG00000010447 I 0.775
CELF3 Danio rerio ENSDARG00000006983 I 0.775
CELF3 Sus scrofa ENSSSCG00000006618 I 0.762
ACH69784 Xenopus laevis ACH69784 I 0.762
Celf6 Dipodomys ordii ENSDORG00000004882 I 0.761
ENSPPYG00000009118 Pongo pygmaeus ENSPPYG00000009118 I 0.757
CELF3 Procavia capensis ENSPCAG00000001623 I 0.752
CELF4 Gasterosteus aculeatus ENSGACG00000008752 I 0.752
CELF4 Gorilla gorilla ENSGGOG00000013920 I 0.752
CELF4 Pteropus vampyrus ENSPVAG00000009204 I 0.752
LOC100386457 Callithrix jacchus ENSCJAG00000021135 I 0.752
BRUNOL4 Homo sapiens ENSG00000101489 D 0.752
CELF4 Tursiops truncatus ENSTTRG00000016826 I 0.748
CELF3 Ochotona princeps ENSOPRG00000011130 I 0.748
Bm1_27610 Brugia malayi Bm1_27610 I 0.733
CRE09771 Caenorhabditis remanei CRE09771 I 0.729
CBG15358 Caenorhabditis briggsae CBG15358 I 0.729
unc-75 Caenorhabditis elegans C17D12.2 D 0.719
CELF6 Oryctolagus cuniculus ENSOCUG00000021663 I 0.718
XP_781047.2 Strongylocentrotus purpuratus XP_781047.2 I 0.701
XP_001192920.1 Strongylocentrotus purpuratus XP_001192920.1 I 0.701