gw1.11.372.1 (Chlorella vulgaris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw1.11.372.1 T56983_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.11.372.1 RRM 26 96

Links

Other RRM family RBPs
Other Chlorella vulgaris RBPs

81 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.718
AMAG_02834 Allomyces macrogynus AMAG_02834 N 0.000
Aqu1.228507 Amphimedon queenslandica Aqu1.228507 N 0.704
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.732
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.718
fgenesh1_pm.00772_#_82 Aspergillus carbonarius fgenesh1_pm.00772_#_82 N 0.000
ACLA_080400 Aspergillus clavatus CADACLAG00007885 N 0.000
AFLA_046450 Aspergillus flavus CADAFLAG00005972 N 0.000
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.000
An12g03930 Aspergillus niger CADANGAG00009835 N 0.000
e_gw1.18.125.1 Batrachochytrium dendrobatidis e_gw1.18.125.1 N 0.000
BDBG_08091 Blastomyces dermatitidis BDBG_08091 N 0.000
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.704
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.718
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.000
BRADI3G48560 Brachypodium distachyon BRADI3G48560 N 0.789
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.732
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.732
Bm1_02935 Brugia malayi Bm1_02935 N 0.718
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.718
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.718
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.704
CHGG_03355 Chaetomium globosum CHGG_03355 N 0.000
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.704
CIMG_00837 Coccidioides immitis CIMG_00837 N 0.000
CPSG_08054 Coccidioides posadasii CPSG_08054 N 0.000
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.000
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.000
fgenesh1_pg.C_scaffold_1000747 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1000747 N 0.000
ncbp2 Dictyostelium discoideum DDB_G0287197 N 0.000
GID1.0044779 Dictyostelium purpureum GID1.0044779 N 0.000
NCBP2 Equus caballus ENSECAG00000016153 N 0.718
FGSG_05488 Fusarium graminearum FGSG_05488 N 0.000
FOXG_09405 Fusarium oxysporum FOXG_09405 N 0.000
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.000
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.718
NCBP2 Gallus gallus ENSGALG00000006843 N 0.000
HCAG_07341 Histoplasma capsulatum HCAG_07341 N 0.000
NCBP2 Homo sapiens ENSG00000114503 N 0.718
XP_002160076.1 Hydra magnipapillata XP_002160076.1 N 0.718
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.000
estExt_Genewise1_worm.C_60324 Laccaria bicolor estExt_Genewise1_worm.C_60324 N 0.000
LOAG_03270 Loa loa LOAG_03270 N 0.732
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.718
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.718
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.718
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.704
MGG_06296 Magnaporthe oryzae MGG_06296 N 0.000
e_gw1.40.70.1 Melampsora laricis populina e_gw1.40.70.1 N 0.000
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.000
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.718
Minc02990 Meloidogyne incognita Minc02990 N 0.000
Minc06129 Meloidogyne incognita Minc06129 N 0.000
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.718
MCYG_04468 Microsporum canis MCYG_04468 N 0.000
MGYG_02166 Microsporum gypseum MGYG_02166 N 0.000
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.718
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.704
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.000
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.704
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.718
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.000
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.718
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.718
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.718
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.000
estExt_gwp.C_920142 Nematostella vectensis estExt_gwp.C_920142 N 0.000
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.000
NCU00210 Neurospora crassa NCU00210 N 0.000
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.000
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.704
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.704
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.718
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.718
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.718
PABG_07236 Paracoccidioides brasiliensis PABG_07236 N 0.000
PHUM535920 Pediculus humanus PHUM535920 N 0.718
Pc13g04070 Penicillium chrysogenum Pc13g04070 N 0.000
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.000
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.000
gwh2.1.1054.1 Phanerochaete chrysosporium gwh2.1.1054.1 N 0.000
PDK_20s1327431g003 Phoenix dactylifera PDK_20s1327431g003 N 0.817
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.704
gw1.1.2136.1 Pleurotus ostreatus gw1.1.2136.1 N 0.000
PredSwiss_ASS2010_2397.2 Pneumocystis carinii PredSwiss_ASS2010_2397.2 N 0.000
PredSwiss_CON682.3 Pneumocystis carinii PredSwiss_CON682.3 N 0.000
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.000
EFA74823.1 Polysphondylium pallidum EFA74823.1 N 0.000
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.718
e_gw1.121.83.1 Postia placenta e_gw1.121.83.1 N 0.000
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.704
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.718
PGTG_01720 Puccinia graminis PGTG_01720 N 0.000
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.000
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.718
estExt_fgenesh1_pm.C_20437 Schizophyllum commune estExt_fgenesh1_pm.C_20437 N 0.000
SPOG_01217 Schizosaccharomyces cryophilus SPOG_01217 N 0.000
SJAG_01064 Schizosaccharomyces japonicus SJAG_01064 N 0.000
SOCG_01831 Schizosaccharomyces octosporus SOCG_01831 N 0.000
cbc2 Schizosaccharomyces pombe SPBC13A2.01c N 0.000
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.000
e_gw1.80.70.1 Selaginella moellendorfii e_gw1.80.70.1 N 0.746
estExt_fgenesh2_kg.C_120041 Serpula lacrymans estExt_fgenesh2_kg.C_120041 N 0.000
SB04G025800 Sorghum bicolor Sb04g025800 N 0.803
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.718
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.000
gw1.1.1171.1 Sporobolomyces roseus gw1.1.1171.1 N 0.000
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.000
XP_802051.1 Strongylocentrotus purpuratus XP_802051.1 N 0.000
XP_001187788.1 Strongylocentrotus purpuratus XP_001187788.1 N 0.000
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.718
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.718
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.000
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.704
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.000
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.000
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.000
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.000
TEQG_01953 Trichophyton equinum TEQG_01953 N 0.000
TERG_03424 Trichophyton rubrum TERG_03424 N 0.000
TESG_01120 Trichophyton tonsurans TESG_01120 N 0.000
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.000
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.718
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.718
VDBG_06810 Verticillium albo atrum VDBG_06810 N 0.000
VDAG_05874 Verticillium dahliae VDAG_05874 N 0.000
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.718
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.732
GRMZM2G034804 Zea mays GRMZM2G034804 N 0.803