CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AAH74336
(
Xenopus laevis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AAH74336
T59540_0.6
Xenbase (2010-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAH74336
RRM
107
176
LLVSNLDFGVSDADIQELFAEFGSLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRSMN
Links
Other
RRM
family RBPs
Other
Xenopus laevis
RBPs
111 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
EuGene1000054
Heterobasidion annosum
EuGene1000054
N
0.000
EuGene8000286
Heterobasidion annosum
EuGene8000286
N
0.000
EuGene8000521
Heterobasidion annosum
EuGene8000521
N
0.000
fgenesh2_pg.C_scaffold_11000363
Heterobasidion annosum
fgenesh2_pg.C_scaffold_11000363
N
0.000
fgenesh2_pg.C_scaffold_15000101
Heterobasidion annosum
fgenesh2_pg.C_scaffold_15000101
N
0.000
fgenesh2_pg.C_scaffold_18000055
Heterobasidion annosum
fgenesh2_pg.C_scaffold_18000055
N
0.000
fgenesh2_pg.C_scaffold_3000140
Heterobasidion annosum
fgenesh2_pg.C_scaffold_3000140
N
0.000
fgenesh2_pg.C_scaffold_5000364
Heterobasidion annosum
fgenesh2_pg.C_scaffold_5000364
N
0.000
fgenesh2_pg.C_scaffold_9000335
Heterobasidion annosum
fgenesh2_pg.C_scaffold_9000335
N
0.000
EuGene6000251
Heterobasidion annosum
EuGene6000251
N
0.000
EuGene5000232
Heterobasidion annosum
EuGene5000232
N
0.000
EuGene1000075
Heterobasidion annosum
EuGene1000075
N
0.000
EuGene15000010
Heterobasidion annosum
EuGene15000010
N
0.000
EuGene2000035
Heterobasidion annosum
EuGene2000035
N
0.000
EuGene2000565
Heterobasidion annosum
EuGene2000565
N
0.000
EuGene2001100
Heterobasidion annosum
EuGene2001100
N
0.000
EuGene5000027
Heterobasidion annosum
EuGene5000027
N
0.000
EuGene5000059
Heterobasidion annosum
EuGene5000059
N
0.000
EuGene5000105
Heterobasidion annosum
EuGene5000105
N
0.000
Genemark.7683_g
Heterobasidion annosum
Genemark.7683_g
N
0.000