BRADI2G43760 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI2G43760 T33199_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
e_gw1.81.40.1
M185_0.6 		Physcomitrella patens RACCUW RNAcompete
Ray et al.(2013)
RNCMPT00206 		0.761
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI2G43760.1 RRM 19 76
BRADI2G43760.1 RRM 118 180
BRADI2G43760.1 RRM 243 305

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

44 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os01g43170 Oryza sativa LOC_Os01g43170 I 0.908
SB03G028150 Sorghum bicolor Sb03g028150 I 0.887
GRMZM2G058039 Zea mays GRMZM2G058039 I 0.862
Glyma14g30490.1 Glycine max Glyma14g30490.1 I 0.789
cassava7218.valid.m1 Manihot esculenta cassava7218.valid.m1 I 0.789
cassava7219.valid.m1 Manihot esculenta cassava7219.valid.m1 I 0.789
BGIOSIBCE002789 Oryza indica BGIOSIBCE002789 N 0.788
cassava29285.valid.m1 Manihot esculenta cassava29285.valid.m1 I 0.784
Glyma06g13130.1 Glycine max Glyma06g13130.1 I 0.784
30169.m006527 Ricinus communis 30169.m006527 I 0.784
Cucsa.202010 Cucumis sativus Cucsa.202010 I 0.784
PDK_20s1513061g004 Phoenix dactylifera PDK_20s1513061g004 I 0.782
Glyma04g41660.1 Glycine max Glyma04g41660.1 I 0.778
ppa005791m Prunus persica ppa005791m I 0.778
Glyma13g08170.1 Glycine max Glyma13g08170.1 I 0.773
Medtr3g124540 Medicago truncatula Medtr3g124540 I 0.769
GSVIVG00028703001 Vitis vinifera GSVIVG00028703001 I 0.768
gw1.326.8.1 Physcomitrella patens gw1.326.8.1 I 0.761
e_gw1.81.40.1 Physcomitrella patens e_gw1.81.40.1 D 0.761
XM_002865910.1 Arabidopsis lyrata fgenesh2_kg.8__1206__AT5G53180.1 I 0.757
ATPTB2 Arabidopsis thaliana AT5G53180-TAIR-G I 0.751
e_gw1.30.357.1 Selaginella moellendorfii e_gw1.30.357.1 I 0.747
MDP0000269393 Malus x domestica MDP0000269393 I 0.746
cassava3019.m1 Manihot esculenta cassava3019.m1 I 0.745
Glyma18g49580.1 Glycine max Glyma18g49580.1 I 0.743
LOC_Os08g33830 Oryza sativa LOC_Os08g33830 I 0.741
GSVIVG00011438001 Vitis vinifera GSVIVG00011438001 I 0.739
A9PHS8_POPTR Populus trichocarpa POPTR_0004s12210 I 0.739
GRMZM2G178169 Zea mays GRMZM2G178169 I 0.735
SB07G021250 Sorghum bicolor Sb07g021250 I 0.735
PK14390.1 Cannabis sativa PK14390.1 I 0.734
ppa004961m Prunus persica ppa004961m I 0.734
Glyma09g37080.1 Glycine max Glyma09g37080.1 I 0.734
mgf005649m Mimulus guttatus mgf005649m I 0.733
XM_002884247.1 Arabidopsis lyrata scaffold_300118.1 I 0.728
28649.m000223 Ricinus communis 28649.m000223 I 0.727
chr1.CM0141.270.nc Lotus japonicus chr1.CM0141.270.nc I 0.727
B9IK00_POPTR Populus trichocarpa POPTR_0017s12160 I 0.723
PTB Arabidopsis thaliana AT3G01150-TAIR-G I 0.719
MDP0000796160 Malus x domestica MDP0000796160 I 0.718
mgf001230m Mimulus guttatus mgf001230m I 0.713
BRADI3G36770 Brachypodium distachyon BRADI3G36770 I 0.711
LOC_Os03g25980 Oryza sativa LOC_Os03g25980 I 0.706
SB01G034060 Sorghum bicolor Sb01g034060 I 0.702