ENSOGAG00000002398 (Otolemur garnettii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOGAG00000002398 T39813_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.797
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.797
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.797
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.776
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000002142 RRM 16 83
ENSOGAP00000002142 RRM 104 174

Links

Other RRM family RBPs
Other Otolemur garnettii RBPs

180 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.782
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.774
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.767
HNRNPA1 Homo sapiens ENSG00000135486 D 0.767
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.767
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.767
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.767
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.767
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.767
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.767
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.767
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.767
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.767
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.767
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.767
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.767
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.767
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.767
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.767
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.767
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.767
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.767
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.767
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.767
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.767
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.767
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.767
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.767
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.767
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.767
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.760
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.760
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.760
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.760
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.760
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.760
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.760
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.760
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.760
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.760
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.760
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.759
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.753
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.753
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.753
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.753
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.753
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.753
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.752
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.748
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.747
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.747
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.747
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.747
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.747
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.747
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.745
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.740
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.740
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.740
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.740
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.740
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.740
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.740
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.740
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.740
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.740
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.740
LOC785445 Bos taurus ENSBTAG00000025621 I 0.740
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.740
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.739
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.738
LOC100054206 Equus caballus ENSECAG00000006699 I 0.738
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.738
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.738
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.733
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.733
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.733
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.733
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.731
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.731
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.730
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.730
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.730
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.727
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.727
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.726
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.726
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.726
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.724
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.724
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.723
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.723
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.721
CBF67672 Xenopus laevis CBF67672 I 0.719
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.719
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.719
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.719
AAH72090 Xenopus laevis AAH72090 I 0.719
CBU92546 Xenopus laevis CBU92546 I 0.719
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.719
AAH45260 Xenopus laevis AAH45260 I 0.719
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.719
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.719
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.719
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.719
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.717
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.717
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.717
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.717
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.716
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.713
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.712
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.712
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.712
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.712
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.712
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.712
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.712
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.712
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.710
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.710
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.710
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.710
ENSGGOG00000024290 Gorilla gorilla ENSGGOG00000024290 I 0.709
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.709
ENSCJAG00000002606 Callithrix jacchus ENSCJAG00000002606 I 0.709
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.709
ENSCJAG00000015222 Callithrix jacchus ENSCJAG00000015222 I 0.709
HNRNPA2B1 Taeniopygia guttata ENSTGUG00000002869 I 0.709
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.709
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.708
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.708
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.706
AAA49741 Xenopus laevis AAA49741 I 0.705
P17130 Xenopus laevis P17130 I 0.705
AAA49742 Xenopus laevis AAA49742 I 0.705
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.705
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.705
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.705
CBU92428 Xenopus laevis CBU92428 I 0.705
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.705
CBF67555 Xenopus laevis CBF67555 I 0.705
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.705
D4A1X0_RAT Rattus norvegicus ENSRNOG00000021254 I 0.704
ENSCAFG00000018456 Canis familiaris ENSCAFG00000018456 I 0.704
HNRNPA2B1 Ornithorhynchus anatinus ENSOANG00000009159 I 0.702
Q5ZME1_CHICK Gallus gallus ENSGALG00000011036 I 0.702
Hnrnpa2b1 Rattus norvegicus ENSRNOG00000011175 I 0.702
HNRNPA2B1 Oryctolagus cuniculus ENSOCUG00000026859 I 0.702
ENSMEUG00000001084 Macropus eugenii ENSMEUG00000001084 I 0.702
Hnrnpa2b1 Mus musculus ENSMUSG00000004980 I 0.702
HNRNPA2B1 Pteropus vampyrus ENSPVAG00000006296 I 0.702
HNRNPA2B1 Gorilla gorilla ENSGGOG00000017072 I 0.702
ENSPPYG00000017715 Pongo pygmaeus ENSPPYG00000017715 I 0.702
ROA2_BOVIN Bos taurus ENSBTAG00000005726 I 0.702
ENSBTAG00000009937 Bos taurus ENSBTAG00000009937 I 0.702
ENSSTOG00000006202 Spermophilus tridecemlineatus ENSSTOG00000006202 I 0.702
HNRNPA2B1 Pan troglodytes ENSPTRG00000019002 I 0.702
HNRNPA2B1 Canis familiaris ENSCAFG00000002885 I 0.702
HNRNPA2B1 Monodelphis domestica ENSMODG00000000603 I 0.702
ENSMEUG00000014479 Macropus eugenii ENSMEUG00000014479 I 0.702
HNRNPA2B1 Meleagris gallopavo ENSMGAG00000010635 I 0.702
ENSCJAG00000021872 Callithrix jacchus ENSCJAG00000021872 I 0.702
Ame_R000626 Ailuropoda melanoleuca Ame_R000626 I 0.702
HNRNPA2B1 Dasypus novemcinctus ENSDNOG00000012928 I 0.702
Hnrnpa2b1 Dipodomys ordii ENSDORG00000005482 I 0.702
HNRNPA2B1 Echinops telfairi ENSETEG00000018577 I 0.702
HNRNPA2B1 Homo sapiens ENSG00000122566 D 0.702
LOC100068539 Equus caballus ENSECAG00000000782 I 0.702
HNRNPA2B1 Myotis lucifugus ENSMLUG00000007578 I 0.702
HNRNPA2B1 Macaca mulatta ENSMMUG00000003619 I 0.702
LOC100401647 Callithrix jacchus ENSCJAG00000007908 I 0.702
HNRNPA2B1 Loxodonta africana ENSLAFG00000006902 I 0.702
HNRNPA2B1 Tursiops truncatus ENSTTRG00000000709 I 0.702
CBU92451 Xenopus laevis CBU92451 I 0.701
P51992 Xenopus laevis P51992 I 0.701
AAA49950 Xenopus laevis AAA49950 I 0.701
AAI69881 Xenopus laevis AAI69881 I 0.701
CBF67578 Xenopus laevis CBF67578 I 0.701