ENSBTAG00000009937 (Bos taurus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSBTAG00000009937 T34830_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.804
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.804
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.804
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.783
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000013110 RRM 16 81
ENSBTAP00000013110 RRM 103 173
ENSBTAP00000043483 RRM 15 80
ENSBTAP00000043483 RRM 102 170
ENSBTAP00000046765 RRM 11 76
ENSBTAP00000046765 RRM 98 168

Links

Other RRM family RBPs
Other Bos taurus RBPs

145 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.796
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.767
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.767
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.760
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.760
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.760
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.760
HNRNPA1 Homo sapiens ENSG00000135486 D 0.760
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.760
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.760
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.760
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.760
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.760
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.760
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.760
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.760
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.760
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.760
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.760
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.760
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.760
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.760
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.760
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.760
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.760
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.760
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.760
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.760
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.760
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.760
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.760
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.759
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.759
LOC100054206 Equus caballus ENSECAG00000006699 I 0.759
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.755
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.753
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.753
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.753
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.753
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.753
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.753
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.753
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.753
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.753
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.750
ENSCAFG00000024636 Canis familiaris ENSCAFG00000024636 I 0.750
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.748
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.747
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.747
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.747
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.747
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.747
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.747
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.747
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.747
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.747
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.747
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.746
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.745
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.745
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.745
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.745
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.745
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.745
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.741
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.741
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.740
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.740
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.740
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.740
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.740
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.740
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.740
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.740
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.740
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.738
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.738
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.738
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.738
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.736
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.733
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.733
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.733
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.733
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.733
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.733
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.733
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.733
ENSETEG00000018059 Echinops telfairi ENSETEG00000018059 I 0.732
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.731
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.731
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.731
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.730
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.730
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.727
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.726
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.726
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.726
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.726
LOC785445 Bos taurus ENSBTAG00000025621 I 0.726
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.726
ENSCAFG00000018456 Canis familiaris ENSCAFG00000018456 I 0.725
ENSCJAG00000007634 Callithrix jacchus ENSCJAG00000007634 I 0.725
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.724
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.724
ENSGGOG00000024290 Gorilla gorilla ENSGGOG00000024290 I 0.721
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.719
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.719
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.719
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.719
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.719
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.719
ENSMICG00000012083 Microcebus murinus ENSMICG00000012083 I 0.718
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.717
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.717
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.717
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.717
ENSCJAG00000015222 Callithrix jacchus ENSCJAG00000015222 I 0.716
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.715
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.715
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.714
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.713
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.712
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.712
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.712
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.711
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.711
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.710
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.710
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.710
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.710
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.709
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.709
ENSCAFG00000000746 Canis familiaris ENSCAFG00000000746 I 0.708
ENSCAFG00000009606 Canis familiaris ENSCAFG00000009606 I 0.707
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.706
RGD1564416 Rattus norvegicus ENSRNOG00000023882 I 0.706
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.706
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.705
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.705
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.703
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.703
ENSOGAG00000002398 Otolemur garnettii ENSOGAG00000002398 I 0.702
ENSRNOG00000017651 Rattus norvegicus ENSRNOG00000017651 I 0.700