ENSG00000231942 (Homo sapiens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSG00000231942 T37366_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.837
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.837
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.837
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.816
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000394145 RRM 2 71
ENSP00000394145 RRM 85 154

Links

Other RRM family RBPs
Other Homo sapiens RBPs

180 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSGGOG00000024290 Gorilla gorilla ENSGGOG00000024290 I 0.943
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.807
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.786
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.786
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.786
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.786
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.786
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.786
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.786
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.786
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.786
HNRNPA1 Homo sapiens ENSG00000135486 D 0.786
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.786
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.786
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.786
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.786
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.786
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.786
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.786
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.786
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.786
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.786
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.786
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.786
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.786
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.786
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.786
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.786
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.786
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.786
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.786
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.786
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.779
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.779
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.779
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.779
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.779
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.779
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.779
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.779
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.779
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.775
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.772
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.772
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.772
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.772
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.772
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.772
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.772
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.772
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.772
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.772
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.772
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.771
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.766
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.766
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.766
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.766
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.766
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.766
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.766
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.766
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.764
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.764
LOC100054206 Equus caballus ENSECAG00000006699 I 0.764
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.764
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.759
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.759
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.759
LOC785445 Bos taurus ENSBTAG00000025621 I 0.759
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.759
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.759
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.759
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.759
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.757
ENSCAFG00000024636 Canis familiaris ENSCAFG00000024636 I 0.757
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.757
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.757
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.757
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.757
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.757
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.757
ENSCJAG00000007634 Callithrix jacchus ENSCJAG00000007634 I 0.754
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.754
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.752
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.752
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.752
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.752
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.750
ENSCJAG00000015222 Callithrix jacchus ENSCJAG00000015222 I 0.750
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.750
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.750
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.747
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.746
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.746
ENSMICG00000012083 Microcebus murinus ENSMICG00000012083 I 0.746
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.745
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.745
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.745
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.745
ENSBTAG00000009937 Bos taurus ENSBTAG00000009937 I 0.745
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.743
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.743
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.743
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.743
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.743
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.743
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.739
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.738
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.738
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.738
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.738
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.738
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.738
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.738
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.738
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.738
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.737
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.736
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.736
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.736
ENSGGOG00000027762 Gorilla gorilla ENSGGOG00000027762 I 0.735
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.734
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.734
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.732
ENSCAFG00000018456 Canis familiaris ENSCAFG00000018456 I 0.732
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.731
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.731
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.731
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.731
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.731
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.731
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.731
ENSOGAG00000002398 Otolemur garnettii ENSOGAG00000002398 I 0.730
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.729
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.729
ENSCAFG00000007918 Canis familiaris ENSCAFG00000007918 I 0.727
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.726
D4ABW2_RAT Rattus norvegicus ENSRNOG00000032168 I 0.725
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.724
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.724
AAH45260 Xenopus laevis AAH45260 I 0.724
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.724
CBF67672 Xenopus laevis CBF67672 I 0.724
AAH72090 Xenopus laevis AAH72090 I 0.724
CBU92546 Xenopus laevis CBU92546 I 0.724
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.724
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.722
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.719
ENSEEUG00000009941 Erinaceus europaeus ENSEEUG00000009941 I 0.717
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.717
ENSMMUG00000018397 Macaca mulatta ENSMMUG00000018397 I 0.717
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.717
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.717
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.717
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.717
ENSGGOG00000025265 Gorilla gorilla ENSGGOG00000025265 I 0.717
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.717
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.716
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.715
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.715
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.715
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.715
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.714
ENSCAFG00000020428 Canis familiaris ENSCAFG00000020428 I 0.714
ENSCAFG00000000746 Canis familiaris ENSCAFG00000000746 I 0.713
CBU92428 Xenopus laevis CBU92428 I 0.710
AAA49742 Xenopus laevis AAA49742 I 0.710
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.710
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.710
CBF67555 Xenopus laevis CBF67555 I 0.710
AAA49741 Xenopus laevis AAA49741 I 0.710
P17130 Xenopus laevis P17130 I 0.710
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.710
ENSRNOG00000017651 Rattus norvegicus ENSRNOG00000017651 I 0.704
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.703
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.703
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.703
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.703
ENSGGOG00000022797 Gorilla gorilla ENSGGOG00000022797 I 0.702