XR_010472.1 (Macaca mulatta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMMUG00000012991 T38903_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.907
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.907
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.907
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.886
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.743
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMMUP00000000703 RRM 16 81
ENSMMUP00000000703 RRM 105 174
ENSMMUP00000002349 RRM 16 81
ENSMMUP00000002349 RRM 105 174

Links

Other RRM family RBPs
Other Macaca mulatta RBPs

248 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.873
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.873
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.873
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.873
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.873
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.873
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.873
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.873
HNRNPA1 Homo sapiens ENSG00000135486 D 0.873
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.873
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.873
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.873
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.873
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.873
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.873
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.873
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.873
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.873
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.873
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.873
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.873
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.873
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.873
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.873
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.873
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.873
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.873
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.871
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.870
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.866
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.866
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.866
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.866
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.866
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.866
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.866
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.866
LOC100054206 Equus caballus ENSECAG00000006699 I 0.864
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.864
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.862
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.859
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.859
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.859
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.859
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.859
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.859
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.859
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.859
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.859
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.859
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.859
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.858
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.857
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.857
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.857
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.855
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.852
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.852
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.852
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.852
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.851
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.850
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.845
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.845
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.845
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.845
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.845
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.845
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.845
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.843
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.843
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.843
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.838
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.838
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.838
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.838
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.838
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.838
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.835
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.832
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.831
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.831
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.831
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.831
LOC785445 Bos taurus ENSBTAG00000025621 I 0.831
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.831
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.830
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.829
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.824
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.824
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.823
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.821
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.820
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.819
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.817
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.817
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.817
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.817
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.817
ENSRNOG00000042093 Rattus norvegicus ENSRNOG00000042093 I 0.816
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.810
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.810
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.810
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.810
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.810
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.807
AAH45260 Xenopus laevis AAH45260 I 0.803
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.803
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.803
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.803
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.803
AAH72090 Xenopus laevis AAH72090 I 0.803
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.803
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.803
CBU92546 Xenopus laevis CBU92546 I 0.803
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.803
CBF67672 Xenopus laevis CBF67672 I 0.803
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.801
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.796
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.796
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.796
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.796
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.796
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.796
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.794
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.793
CBF67555 Xenopus laevis CBF67555 I 0.789
AAA49742 Xenopus laevis AAA49742 I 0.789
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.789
CBU92428 Xenopus laevis CBU92428 I 0.789
P17130 Xenopus laevis P17130 I 0.789
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.789
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.789
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.789
AAA49741 Xenopus laevis AAA49741 I 0.789
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.789
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.789
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.786
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.782
ENSMMUG00000018397 Macaca mulatta ENSMMUG00000018397 I 0.782
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.782
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.782
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.782
ENSLAFG00000029171 Loxodonta africana ENSLAFG00000029171 I 0.780
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.779
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.778
ENSCAFG00000024812 Canis familiaris ENSCAFG00000024812 I 0.775
ENSCJAG00000032970 Callithrix jacchus ENSCJAG00000032970 I 0.775
ENSCAFG00000008301 Canis familiaris ENSCAFG00000008301 I 0.773
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.769
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.769
ENSEEUG00000011837 Erinaceus europaeus ENSEEUG00000011837 I 0.768
ENSRNOG00000023438 Rattus norvegicus ENSRNOG00000023438 I 0.768
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.767
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.767
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.762
ENSCAFG00000013932 Canis familiaris ENSCAFG00000013932 I 0.761
ENSCAFG00000016707 Canis familiaris ENSCAFG00000016707 I 0.761
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.761
ENSGGOG00000025265 Gorilla gorilla ENSGGOG00000025265 I 0.761
ENSEEUG00000009941 Erinaceus europaeus ENSEEUG00000009941 I 0.761
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.754
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.754
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.754
D4ABW2_RAT Rattus norvegicus ENSRNOG00000032168 I 0.752
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.750
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.750
HNRNPA3 Homo sapiens ENSG00000170144 I 0.748
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.748
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.748
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.748
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.748
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.748
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.748
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.748
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.748
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.748
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.748
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.748
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.748
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.748
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.748
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.748
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.748
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.748
LOC781499 Bos taurus ENSBTAG00000021580 I 0.748
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.748
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.746
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.746
LOC100066794 Equus caballus ENSECAG00000023237 I 0.746
AAA49949 Xenopus laevis AAA49949 I 0.746
hnrnpa1 Danio rerio ENSDARG00000036675 I 0.746
P51968 Xenopus laevis P51968 I 0.746
Gm8991 Mus musculus ENSMUSG00000059179 I 0.746
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.746
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.746
ENSCAFG00000006386 Canis familiaris ENSCAFG00000006386 I 0.745
CBF67578 Xenopus laevis CBF67578 I 0.743
P51992 Xenopus laevis P51992 I 0.743
AAI69881 Xenopus laevis AAI69881 I 0.743
CBU92451 Xenopus laevis CBU92451 I 0.743
AAA49950 Xenopus laevis AAA49950 I 0.743
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.743
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.741
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.741
ENSSSCG00000005428 Sus scrofa ENSSSCG00000005428 I 0.739
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.739
ENSTNIG00000015047 Tetraodon nigroviridis ENSTNIG00000015047 I 0.739
ENSCAFG00000007918 Canis familiaris ENSCAFG00000007918 I 0.738
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.736
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.736
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.733
ENSCJAG00000015222 Callithrix jacchus ENSCJAG00000015222 I 0.732
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.730
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.729
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.729
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.729
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.727
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.727
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.726
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.726
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.725
ENSCJAG00000007634 Callithrix jacchus ENSCJAG00000007634 I 0.724
ENSPTRG00000018253 Pan troglodytes ENSPTRG00000018253 I 0.723
ENSGGOG00000024290 Gorilla gorilla ENSGGOG00000024290 I 0.722
ENSETEG00000001872 Echinops telfairi ENSETEG00000001872 I 0.721
ENSCAFG00000018456 Canis familiaris ENSCAFG00000018456 I 0.719
ENSGGOG00000025446 Gorilla gorilla ENSGGOG00000025446 I 0.718
zgc:66127 Danio rerio ENSDARG00000011020 I 0.718
ENSBTAG00000009937 Bos taurus ENSBTAG00000009937 I 0.717
ENSCAFG00000000746 Canis familiaris ENSCAFG00000000746 I 0.714
ENSGGOG00000022797 Gorilla gorilla ENSGGOG00000022797 I 0.713
hnrnpa3 Danio rerio ENSDARG00000059351 I 0.711
ENSOGAG00000002398 Otolemur garnettii ENSOGAG00000002398 I 0.710
ENSCAFG00000020428 Canis familiaris ENSCAFG00000020428 I 0.708
ENSETEG00000018059 Echinops telfairi ENSETEG00000018059 I 0.708
HNRNPA3 Gasterosteus aculeatus ENSGACG00000004477 I 0.708
ENSCAFG00000019097 Canis familiaris ENSCAFG00000019097 I 0.707
ENSGGOG00000027762 Gorilla gorilla ENSGGOG00000027762 I 0.707
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.706
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.706
ENSCAFG00000018580 Canis familiaris ENSCAFG00000018580 I 0.704
HNRNPA3 Sorex araneus ENSSARG00000007605 I 0.704
ENSCAFG00000009606 Canis familiaris ENSCAFG00000009606 I 0.703
ENSCAFG00000003921 Canis familiaris ENSCAFG00000003921 I 0.701
HNRNPA2B1 Taeniopygia guttata ENSTGUG00000002869 I 0.701
HNRNPA3 Oryzias latipes ENSORLG00000017561 I 0.701