XM_001106745.1 (Macaca mulatta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMMUG00000031809 T39018_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.894
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.894
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.894
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.872
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.723
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMMUP00000039316 RRM 16 85
ENSMMUP00000039316 RRM 107 176
ENSMMUP00000039317 RRM 16 85
ENSMMUP00000039317 RRM 107 176

Links

Other RRM family RBPs
Other Macaca mulatta RBPs

252 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC100054206 Equus caballus ENSECAG00000006699 I 0.893
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.880
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.880
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.880
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.880
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.880
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.880
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.880
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.880
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.880
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.880
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.880
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.880
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.880
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.880
HNRNPA1 Homo sapiens ENSG00000135486 D 0.880
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.880
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.880
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.880
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.880
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.880
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.880
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.880
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.880
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.880
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.880
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.880
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.880
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.880
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.880
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.879
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.873
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.873
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.873
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.873
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.873
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.873
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.873
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.873
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.873
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.873
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.866
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.866
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.866
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.866
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.866
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.866
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.866
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.866
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.864
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.859
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.859
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.859
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.859
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.859
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.852
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.852
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.852
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.852
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.850
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.850
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.845
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.845
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.845
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.845
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.845
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.845
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.845
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.845
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.845
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.844
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.844
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.843
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.843
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.843
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.843
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.843
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.839
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.838
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.838
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.838
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.837
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.836
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.836
LOC785445 Bos taurus ENSBTAG00000025621 I 0.831
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.831
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.831
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.831
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.831
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.830
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.829
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.829
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.824
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.824
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.824
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.824
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.824
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.824
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.824
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.824
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.821
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.819
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.817
ENSMMUG00000018397 Macaca mulatta ENSMMUG00000018397 I 0.817
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.817
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.814
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.810
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.810
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.810
CBF67672 Xenopus laevis CBF67672 I 0.810
AAH45260 Xenopus laevis AAH45260 I 0.810
CBU92546 Xenopus laevis CBU92546 I 0.810
AAH72090 Xenopus laevis AAH72090 I 0.810
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.810
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.805
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.803
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.803
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.803
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.803
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.803
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.803
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.803
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.803
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.803
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.803
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.800
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.800
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.796
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.796
AAA49741 Xenopus laevis AAA49741 I 0.796
P17130 Xenopus laevis P17130 I 0.796
AAA49742 Xenopus laevis AAA49742 I 0.796
CBF67555 Xenopus laevis CBF67555 I 0.796
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.796
CBU92428 Xenopus laevis CBU92428 I 0.796
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.796
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.792
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.789
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.789
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.789
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.789
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.789
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.782
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.781
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.776
ENSLAFG00000029171 Loxodonta africana ENSLAFG00000029171 I 0.773
ENSCAFG00000008301 Canis familiaris ENSCAFG00000008301 I 0.773
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.772
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.772
ENSRNOG00000023438 Rattus norvegicus ENSRNOG00000023438 I 0.768
ENSRNOG00000042093 Rattus norvegicus ENSRNOG00000042093 I 0.764
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.764
ENSCJAG00000032970 Callithrix jacchus ENSCJAG00000032970 I 0.761
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.761
ENSGGOG00000025265 Gorilla gorilla ENSGGOG00000025265 I 0.761
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.761
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.761
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.757
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.755
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.755
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.755
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.755
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.755
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.755
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.755
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.755
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.755
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.755
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.755
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.755
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.755
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.755
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.755
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.755
HNRNPA3 Homo sapiens ENSG00000170144 I 0.755
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.755
LOC781499 Bos taurus ENSBTAG00000021580 I 0.755
ENSSSCG00000005428 Sus scrofa ENSSSCG00000005428 I 0.754
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.754
AAA49949 Xenopus laevis AAA49949 I 0.754
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.754
Gm8991 Mus musculus ENSMUSG00000059179 I 0.754
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.754
P51968 Xenopus laevis P51968 I 0.754
hnrnpa1 Danio rerio ENSDARG00000036675 I 0.754
ENSEEUG00000009941 Erinaceus europaeus ENSEEUG00000009941 I 0.754
LOC100066794 Equus caballus ENSECAG00000023237 I 0.754
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.754
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.753
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.750
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.748
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.748
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.748
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.747
ENSEEUG00000011837 Erinaceus europaeus ENSEEUG00000011837 I 0.746
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.746
ENSTNIG00000015047 Tetraodon nigroviridis ENSTNIG00000015047 I 0.746
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.745
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.743
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.743
AAI69881 Xenopus laevis AAI69881 I 0.743
ENSGGOG00000024290 Gorilla gorilla ENSGGOG00000024290 I 0.743
AAA49950 Xenopus laevis AAA49950 I 0.743
CBU92451 Xenopus laevis CBU92451 I 0.743
P51992 Xenopus laevis P51992 I 0.743
CBF67578 Xenopus laevis CBF67578 I 0.743
ENSCAFG00000024812 Canis familiaris ENSCAFG00000024812 I 0.743
ENSCJAG00000007634 Callithrix jacchus ENSCJAG00000007634 I 0.738
ENSCAFG00000007918 Canis familiaris ENSCAFG00000007918 I 0.738
ENSBTAG00000009937 Bos taurus ENSBTAG00000009937 I 0.738
D4ABW2_RAT Rattus norvegicus ENSRNOG00000032168 I 0.738
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.736
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.736
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.736
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.736
ENSCAFG00000018456 Canis familiaris ENSCAFG00000018456 I 0.733
zgc:66127 Danio rerio ENSDARG00000011020 I 0.732
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.732
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.729
ENSCAFG00000016707 Canis familiaris ENSCAFG00000016707 I 0.729
ENSCAFG00000013932 Canis familiaris ENSCAFG00000013932 I 0.729
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.727
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.726
ENSETEG00000001872 Echinops telfairi ENSETEG00000001872 I 0.723
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.719
ENSOGAG00000002398 Otolemur garnettii ENSOGAG00000002398 I 0.717
ENSCJAG00000015222 Callithrix jacchus ENSCJAG00000015222 I 0.715
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.715
ENSGGOG00000027762 Gorilla gorilla ENSGGOG00000027762 I 0.715
ENSCAFG00000019097 Canis familiaris ENSCAFG00000019097 I 0.714
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.713
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.713
hnrnpa3 Danio rerio ENSDARG00000059351 I 0.711
ENSSARG00000008882 Sorex araneus ENSSARG00000008882 I 0.711
ENSGGOG00000025446 Gorilla gorilla ENSGGOG00000025446 I 0.711
ENSCAFG00000009606 Canis familiaris ENSCAFG00000009606 I 0.710
D3ZNE1_RAT Rattus norvegicus ENSRNOG00000005671 I 0.708
ENSETEG00000018059 Echinops telfairi ENSETEG00000018059 I 0.708
ENSMODG00000002376 Monodelphis domestica ENSMODG00000002376 I 0.708
ENSCAFG00000018580 Canis familiaris ENSCAFG00000018580 I 0.708
HNRNPA3 Gasterosteus aculeatus ENSGACG00000004477 I 0.708
ENSCAFG00000017448 Canis familiaris ENSCAFG00000017448 I 0.708
ENSCAFG00000003921 Canis familiaris ENSCAFG00000003921 I 0.708
ENSCAFG00000000746 Canis familiaris ENSCAFG00000000746 I 0.707
HNRNPA3 Sorex araneus ENSSARG00000007605 I 0.704
ENSPTRG00000018253 Pan troglodytes ENSPTRG00000018253 I 0.704
ENSMICG00000012083 Microcebus murinus ENSMICG00000012083 I 0.703
ENSCAFG00000024636 Canis familiaris ENSCAFG00000024636 I 0.701
HNRNPA2B1 Taeniopygia guttata ENSTGUG00000002869 I 0.701
HNRNPA3 Oryzias latipes ENSORLG00000017561 I 0.701
ENSCAFG00000006386 Canis familiaris ENSCAFG00000006386 I 0.700