ENSGGOG00000025446 (Gorilla gorilla)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGGOG00000025446 T37928_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.823
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.823
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.823
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.801
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.766
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000025794 RRM 5 73
ENSGGOP00000025794 RRM 96 165

Links

Other RRM family RBPs
Other Gorilla gorilla RBPs

237 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSPTRG00000018253 Pan troglodytes ENSPTRG00000018253 I 0.964
ENSPPYG00000016683 Pongo pygmaeus ENSPPYG00000016683 I 0.928
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.887
LOC100066794 Equus caballus ENSECAG00000023237 I 0.886
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.886
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.886
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.879
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.879
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.879
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.879
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.879
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.879
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.879
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.879
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.879
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.879
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.879
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.879
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.879
HNRNPA3 Homo sapiens ENSG00000170144 I 0.879
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.879
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.879
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.879
LOC781499 Bos taurus ENSBTAG00000021580 I 0.879
Gm8991 Mus musculus ENSMUSG00000059179 I 0.879
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.879
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.879
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.879
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.879
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.872
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.857
HNRNPA3 Microcebus murinus ENSMICG00000005513 I 0.851
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.850
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.844
P51968 Xenopus laevis P51968 I 0.843
AAA49949 Xenopus laevis AAA49949 I 0.843
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.837
HNRNPA3 Sorex araneus ENSSARG00000007605 I 0.836
CBF67578 Xenopus laevis CBF67578 I 0.831
AAA49950 Xenopus laevis AAA49950 I 0.831
D3ZNE1_RAT Rattus norvegicus ENSRNOG00000005671 I 0.831
P51992 Xenopus laevis P51992 I 0.831
AAI69881 Xenopus laevis AAI69881 I 0.831
CBU92451 Xenopus laevis CBU92451 I 0.831
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.830
Ame_R015370 Ailuropoda melanoleuca Ame_R015370 I 0.821
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.814
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.814
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.814
ENSGGOG00000022020 Gorilla gorilla ENSGGOG00000022020 I 0.813
ENSRNOG00000013650 Rattus norvegicus ENSRNOG00000013650 I 0.809
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.807
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.807
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.807
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.807
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.807
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.807
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.807
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.807
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.807
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.807
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.807
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.807
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.807
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.807
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.807
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.807
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.807
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.807
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.807
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.807
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.807
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.807
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.807
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.807
HNRNPA1 Homo sapiens ENSG00000135486 D 0.807
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.807
D3ZX95_RAT Rattus norvegicus ENSRNOG00000027006 I 0.801
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.800
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.800
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.800
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.800
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.800
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.800
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.800
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.794
ENSSSCG00000015989 Sus scrofa ENSSSCG00000015989 I 0.794
HNRNPA3 Loxodonta africana ENSLAFG00000027712 I 0.794
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.793
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.793
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.793
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.793
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.793
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.793
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.793
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.793
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.793
ENSRNOG00000030901 Rattus norvegicus ENSRNOG00000030901 I 0.793
ENSDORG00000011155 Dipodomys ordii ENSDORG00000011155 I 0.787
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.786
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.786
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.786
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.786
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.786
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.786
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.786
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.786
ENSCJAG00000006928 Callithrix jacchus ENSCJAG00000006928 I 0.786
LOC785445 Bos taurus ENSBTAG00000025621 I 0.780
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.779
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.779
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.779
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.779
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.779
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.779
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.771
AAH45260 Xenopus laevis AAH45260 I 0.771
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.771
CBF67672 Xenopus laevis CBF67672 I 0.771
CBU92546 Xenopus laevis CBU92546 I 0.771
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.771
AAH72090 Xenopus laevis AAH72090 I 0.771
hnrnpa3 Danio rerio ENSDARG00000059351 I 0.771
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.771
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.771
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.768
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.764
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.764
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.764
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.764
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.764
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.759
P17130 Xenopus laevis P17130 I 0.757
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.757
CBU92428 Xenopus laevis CBU92428 I 0.757
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.757
ENSTNIG00000015047 Tetraodon nigroviridis ENSTNIG00000015047 I 0.757
AAA49741 Xenopus laevis AAA49741 I 0.757
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.757
AAA49742 Xenopus laevis AAA49742 I 0.757
CBF67555 Xenopus laevis CBF67555 I 0.757
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.752
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.752
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.752
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.752
HNRNPA3 Tetraodon nigroviridis ENSTNIG00000016958 I 0.750
Q1KKS6_FUGRU Takifugu rubripes ENSTRUG00000017504 I 0.746
HNRNPA3 Oryzias latipes ENSORLG00000017561 I 0.746
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.745
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.745
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.745
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.745
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.745
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.739
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.738
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.738
ENSRNOG00000030250 Rattus norvegicus ENSRNOG00000030250 I 0.733
HNRNPA3 Gasterosteus aculeatus ENSGACG00000004477 I 0.732
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.732
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.732
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.732
LOC100054206 Equus caballus ENSECAG00000006699 I 0.732
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.730
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.730
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.730
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.729
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.729
hnrnpa1 Danio rerio ENSDARG00000036675 I 0.729
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.729
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.727
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.725
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.725
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.725
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.723
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.723
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.723
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.720
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.718
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.718
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.718
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.718
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.718
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.716
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.716
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.716
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.716
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.716
ENSPPYG00000001326 Pongo pygmaeus ENSPPYG00000001326 I 0.716
zgc:66127 Danio rerio ENSDARG00000011020 I 0.714
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.711
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.711
D4A8U2_RAT Rattus norvegicus ENSRNOG00000007252 I 0.709
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.709
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.709
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.709
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.709
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.709
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.709
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.707
ENSOCUG00000006431 Oryctolagus cuniculus ENSOCUG00000006431 I 0.707
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.704
ENSPPYG00000017715 Pongo pygmaeus ENSPPYG00000017715 I 0.703
HNRNPA2B1 Oryctolagus cuniculus ENSOCUG00000026859 I 0.703
Hnrnpa2b1 Mus musculus ENSMUSG00000004980 I 0.703
HNRNPA2B1 Ornithorhynchus anatinus ENSOANG00000009159 I 0.703
HNRNPA2B1 Gorilla gorilla ENSGGOG00000017072 I 0.703
Ame_R000626 Ailuropoda melanoleuca Ame_R000626 I 0.703
HNRNPA2B1 Echinops telfairi ENSETEG00000018577 I 0.703
Q5ZME1_CHICK Gallus gallus ENSGALG00000011036 I 0.703
LOC100068539 Equus caballus ENSECAG00000000782 I 0.703
HNRNPA2B1 Loxodonta africana ENSLAFG00000006902 I 0.703
HNRNPA2B1 Homo sapiens ENSG00000122566 D 0.703
ROA2_BOVIN Bos taurus ENSBTAG00000005726 I 0.703
HNRNPA2B1 Monodelphis domestica ENSMODG00000000603 I 0.703
HNRNPA2B1 Macaca mulatta ENSMMUG00000003619 I 0.703
ENSCJAG00000021872 Callithrix jacchus ENSCJAG00000021872 I 0.703
LOC100401647 Callithrix jacchus ENSCJAG00000007908 I 0.703
HNRNPA2B1 Myotis lucifugus ENSMLUG00000007578 I 0.703
HNRNPA2B1 Taeniopygia guttata ENSTGUG00000002869 I 0.703
HNRNPA2B1 Meleagris gallopavo ENSMGAG00000010635 I 0.703
ENSSTOG00000006202 Spermophilus tridecemlineatus ENSSTOG00000006202 I 0.703
HNRNPA2B1 Pan troglodytes ENSPTRG00000019002 I 0.703
HNRNPA2B1 Tursiops truncatus ENSTTRG00000000709 I 0.703
Hnrnpa2b1 Rattus norvegicus ENSRNOG00000011175 I 0.703
Hnrnpa2b1 Dipodomys ordii ENSDORG00000005482 I 0.703
HNRNPA2B1 Dasypus novemcinctus ENSDNOG00000012928 I 0.703
HNRNPA2B1 Pteropus vampyrus ENSPVAG00000006296 I 0.703
ENSMEUG00000001084 Macropus eugenii ENSMEUG00000001084 I 0.703
HNRNPA2B1 Canis familiaris ENSCAFG00000002885 I 0.703
ENSMEUG00000014479 Macropus eugenii ENSMEUG00000014479 I 0.703
ENSEEUG00000000925 Erinaceus europaeus ENSEEUG00000000925 I 0.703
ENSRNOG00000033211 Rattus norvegicus ENSRNOG00000033211 I 0.703
ENSMMUG00000018397 Macaca mulatta ENSMMUG00000018397 I 0.702
ENSRNOG00000042093 Rattus norvegicus ENSRNOG00000042093 I 0.702
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.702
ENSRNOG00000042377 Rattus norvegicus ENSRNOG00000042377 I 0.702
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.701