mgf014417m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf014417m T53737_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf014417m RRM 75 145
mgf014417m RRM 167 238
mgf014417m RRM 273 337

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29842.m003612 Ricinus communis 29842.m003612 N 0.798
Glyma13g27570.1 Glycine max Glyma13g27570.1 I 0.788
mgf010468m Mimulus guttatus mgf010468m I 0.788
PK10695.1 Cannabis sativa PK10695.1 I 0.784
Glyma15g11380.1 Glycine max Glyma15g11380.1 I 0.784
Cucsa.085920 Cucumis sativus Cucsa.085920 I 0.779
Glyma07g38940.1 Glycine max Glyma07g38940.1 I 0.779
Glyma17g01800.1 Glycine max Glyma17g01800.1 I 0.779
Cucsa.085910 Cucumis sativus Cucsa.085910 I 0.774
B9H1C9_POPTR Populus trichocarpa POPTR_0004s01690 N 0.774
cassava37001.valid.m1 Manihot esculenta cassava37001.valid.m1 I 0.769
cassava37000.valid.m1 Manihot esculenta cassava37000.valid.m1 I 0.769
cassava36999.valid.m1 Manihot esculenta cassava36999.valid.m1 I 0.769
cassava37002.valid.m1 Manihot esculenta cassava37002.valid.m1 I 0.769
cassava37003.valid.m1 Manihot esculenta cassava37003.valid.m1 I 0.769
chr6.CM0139.780.nd Lotus japonicus chr6.CM0139.780.nd I 0.764
29666.m001436 Ricinus communis 29666.m001436 I 0.764
MDP0000294628 Malus x domestica MDP0000294628 I 0.764
MDP0000614064 Malus x domestica MDP0000614064 N 0.764
ppa006617m Prunus persica ppa006617m N 0.760
cassava35906.valid.m1 Manihot esculenta cassava35906.valid.m1 I 0.760
XM_002889837.1 Arabidopsis lyrata fgenesh2_kg.1__1255__AT1G11650.2 N 0.755
ppa006577m Prunus persica ppa006577m I 0.755
A9PGI8_POPTR Populus trichocarpa POPTR_0001s45000 I 0.750
ATRBP45B Arabidopsis thaliana AT1G11650-TAIR-G N 0.750
MDP0000223369 Malus x domestica MDP0000223369 N 0.750
cassava44220.valid.m1 Manihot esculenta cassava44220.valid.m1 N 0.745
cassava44219.valid.m1 Manihot esculenta cassava44219.valid.m1 N 0.745
Medtr8g146650 Medicago truncatula Medtr8g146650 N 0.740
chr4.CM1334.150.nc Lotus japonicus chr4.CM1334.150.nc N 0.736
XM_002867483.1 Arabidopsis lyrata scaffold_701590.1 I 0.731
ATRBP45A Arabidopsis thaliana AT5G54900-TAIR-G N 0.726
XM_002864318.1 Arabidopsis lyrata fgenesh2_kg.8__1388__AT5G54900.1 N 0.726
ATRBP45C Arabidopsis thaliana AT4G27000-TAIR-G N 0.726
GRMZM2G426591 Zea mays GRMZM2G426591 N 0.712
SB01G016170 Sorghum bicolor Sb01g016170 N 0.707
LOC_Os03g37270 Oryza sativa LOC_Os03g37270 N 0.707
LOC_Os08g09100 Oryza sativa LOC_Os08g09100 N 0.702