27955.m000377 (Ricinus communis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 27955.m000377 T20577_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
27955.m000377 KH 144 217

Links

Other KH family RBPs
Other Ricinus communis RBPs

60 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29945.m000086 Ricinus communis 29945.m000086 N 0.797
AT2G38610 Arabidopsis thaliana AT2G38610-TAIR-G N 0.859
AT3G08620 Arabidopsis thaliana AT3G08620-TAIR-G N 0.853
BGIOSIBCE013438 Oryza indica BGIOSIBCE013438 N 0.784
BGIOSIBCE019437 Oryza indica BGIOSIBCE019437 N 0.706
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.714
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.707
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.726
BRADI2G22090 Brachypodium distachyon BRADI2G22090 N 0.726
cassava25198.valid.m1 Manihot esculenta cassava25198.valid.m1 N 0.946
cassava38069.valid.m1 Manihot esculenta cassava38069.valid.m1 N 0.784
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.959
chr3.CM0634.210.nc Lotus japonicus chr3.CM0634.210.nc N 0.868
Cucsa.130740 Cucumis sativus Cucsa.130740 N 0.920
Cucsa.177080 Cucumis sativus Cucsa.177080 N 0.905
XM_002882529.1 Arabidopsis lyrata fgenesh2_kg.3__864__AT3G08620.1 N 0.840
XM_002881558.1 Arabidopsis lyrata fgenesh2_kg.4__1930__AT2G38610.2 N 0.859
Glyma02g40440.1 Glycine max Glyma02g40440.1 N 0.813
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.831
Glyma09g40820.1 Glycine max Glyma09g40820.1 N 0.933
Glyma11g31530.1 Glycine max Glyma11g31530.1 N 0.851
Glyma14g38730.1 Glycine max Glyma14g38730.1 N 0.813
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.919
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.783
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.920
GRMZM2G063643 Zea mays GRMZM2G063643 N 0.787
GRMZM2G085582 Zea mays GRMZM2G085582 N 0.711
GRMZM2G108677 Zea mays GRMZM2G108677 N 0.800
GRMZM2G122569 Zea mays GRMZM2G122569 N 0.711
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.827
GSVIVG00024534001 Vitis vinifera GSVIVG00024534001 N 0.747
GSVIVG00029865001 Vitis vinifera GSVIVG00029865001 N 0.932
LjSGA_139736.1.1 Lotus japonicus LjSGA_139736.1.1 N 0.711
LjT28H07.110.nc Lotus japonicus LjT28H07.110.nc N 0.933
LOC_Os01g60260 Oryza sativa LOC_Os01g60260 N 0.702
LOC_Os03g60110 Oryza sativa LOC_Os03g60110 N 0.811
LOC_Os05g40290 Oryza sativa LOC_Os05g40290 N 0.706
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.702
MDP0000119110 Malus x domestica MDP0000119110 N 0.932
MDP0000186494 Malus x domestica MDP0000186494 N 0.946
MDP0000501473 Malus x domestica MDP0000501473 N 0.932
MDP0000665847 Malus x domestica MDP0000665847 N 0.946
Medtr3g083820 Medicago truncatula Medtr3g083820 N 0.867
Medtr5g083520 Medicago truncatula Medtr5g083520 N 0.732
Medtr7g080640 Medicago truncatula Medtr7g080640 N 0.868
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.932
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.932
mgf005196m Mimulus guttatus mgf005196m N 0.907
mgf011994m Mimulus guttatus mgf011994m N 0.787
PDK_20s1595621g003 Phoenix dactylifera PDK_20s1595621g003 N 0.892
PK22673.1 Cannabis sativa PK22673.1 N 0.880
PK23097.1 Cannabis sativa PK23097.1 N 0.946
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.960
B9I777_POPTR Populus trichocarpa POPTR_0013s15580 N 0.770
POPTR_0016s14760 Populus trichocarpa POPTR_0016s14760 N 0.835
B9INJ7_POPTR Populus trichocarpa POPTR_0019s15270 N 0.824
ppa009701m Prunus persica ppa009701m N 0.933
SB01G003680 Sorghum bicolor Sb01g003680 N 0.813
SB02G006770 Sorghum bicolor Sb02g006770 N 0.813
SB03G038070 Sorghum bicolor Sb03g038070 N 0.706