RBM42_BOVIN (Bos taurus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSBTAG00000013440 T34859_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM42
M142_0.6 		Homo sapiens AACUAMG RNAcompete
Ray et al.(2013)
RNCMPT00151 		1.000
ENSXETG00000017599
M237_0.6 		Xenopus tropicalis WACUAC RNAcompete
Ray et al.(2013)
RNCMPT00282 		0.958
CG2931
M138_0.6 		Drosophila melanogaster DACUAAG RNAcompete
Ray et al.(2013)
RNCMPT00147 		0.704
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000017880 RRM 384 454
ENSBTAP00000017884 RRM 351 421

Links

Other RRM family RBPs
Other Bos taurus RBPs

111 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL000695 Aedes aegypti AAEL000695 I 0.000
BGIBMGA010431 Bombyx mori BGIBMGA010431 I 0.000
CPIJ016329 Culex quinquefasciatus CPIJ016329 I 0.000
CpipJ_CPIJ016329 Culex pipiens CpipJ_CPIJ016329 I 0.000
estExt_fgenesh2_pm.C_730008 Branchiostoma floridae estExt_fgenesh2_pm.C_730008 I 0.000
GE18585 Drosophila yakuba FBgn0235992 N 0.000
GA25731-RA Drosophila pseudoobscura FBgn0247108 N 0.000
FBgn0262475 Drosophila melanogaster FBgn0262475 I 0.000