PCBP4 (Gasterosteus aculeatus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSGACG00000002664 T18822_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.772
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.746
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.746
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.741
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.741
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000003487 KH 17 77
ENSGACP00000003487 KH 101 164
ENSGACP00000003487 KH 267 329
ENSGACP00000003489 KH 22 82
ENSGACP00000003489 KH 106 169
ENSGACP00000003489 KH 248 310

Links

Other KH family RBPs
Other Gasterosteus aculeatus RBPs

105 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
18240_YNL175C Saccharomyces mikatae 18240_YNL175C N 0.000
18688_YNL175C Saccharomyces paradoxus 18688_YNL175C N 0.000
20286_YNL175C Saccharomyces bayanus 20286_YNL175C N 0.000
A7TL72_VANPO Vanderwaltozyma polyspora A7TL72_VANPO N 0.000
KLTH0B06886g Kluyveromyces thermotolerans KLTH0B06886g N 0.000
SAKL0E12738g Lachancea kluyveri SAKL0E12738g N 0.000