MDP0000277305 (Malus x domestica)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 MDP0000277305 T25199_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000277305 PUF 1289 1323
MDP0000277305 PUF 1325 1359
MDP0000277305 PUF 1361 1395
MDP0000277305 PUF 1397 1431
MDP0000277305 PUF 1433 1467
MDP0000277305 PUF 1470 1504
MDP0000277305 PUF 1506 1540
MDP0000277305 PUF 1548 1582

Links

Other PUF family RBPs
Other Malus x domestica RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCING00000010611 Ciona intestinalis ENSCING00000010611 N 0.000
fgenesh2_kg.4_#_2144_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.4_#_2144_#_11486_1_CFPN N 0.000
fgenesh2_kg.4_#_2864_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.4_#_2864_#_11486_1_CFPN N 0.000
fgenesh2_kg.5_#_1694_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.5_#_1694_#_11486_1_CFPN N 0.000
fgenesh2_kg.5_#_495_#_0_0_FS3H43Z04IKC5M_CFOT Serpula lacrymans fgenesh2_kg.5_#_495_#_0_0_FS3H43Z04IKC5M_CFOT N 0.000
fgenesh2_kg.6_#_1126_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.6_#_1126_#_11486_1_CFPN N 0.000
fgenesh2_kg.7_#_2034_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.7_#_2034_#_11486_1_CFPN N 0.000
fgenesh2_kg.7_#_456_#_0_0_FS3H43Z04IKC5M_CFOT Serpula lacrymans fgenesh2_kg.7_#_456_#_0_0_FS3H43Z04IKC5M_CFOT N 0.000
fgenesh2_kg.8_#_1276_#_0_0_FS3H43Z04IKC5M_CFOT Serpula lacrymans fgenesh2_kg.8_#_1276_#_0_0_FS3H43Z04IKC5M_CFOT N 0.000
fgenesh2_kg.8_#_1578_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.8_#_1578_#_11486_1_CFPN N 0.000
fgenesh2_kg.3_#_1118_#_0_0_FS3H43Z04IKC5M_CFOT Serpula lacrymans fgenesh2_kg.3_#_1118_#_0_0_FS3H43Z04IKC5M_CFOT N 0.000
fgenesh2_kg.2_#_266_#_0_0_FS3H43Z04IKC5M_CFOT Serpula lacrymans fgenesh2_kg.2_#_266_#_0_0_FS3H43Z04IKC5M_CFOT N 0.000
fgenesh2_kg.2_#_2458_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.2_#_2458_#_11486_1_CFPN N 0.000
K08D12.3 Caenorhabditis elegans K08D12.3 N 0.000
fgenesh2_kg.10_#_112_#_0_0_FS3H43Z04IKC5M_CFOT Serpula lacrymans fgenesh2_kg.10_#_112_#_0_0_FS3H43Z04IKC5M_CFOT N 0.000
fgenesh2_kg.1_#_1210_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.1_#_1210_#_11486_1_CFPN N 0.000
fgenesh2_kg.12_#_635_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.12_#_635_#_11486_1_CFPN N 0.000
fgenesh2_kg.14_#_548_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.14_#_548_#_11486_1_CFPN N 0.000
fgenesh2_kg.15_#_627_#_0_0_FS3H43Z04IKC5M_CFOT Serpula lacrymans fgenesh2_kg.15_#_627_#_0_0_FS3H43Z04IKC5M_CFOT N 0.000
fgenesh2_kg.17_#_294_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.17_#_294_#_11486_1_CFPN N 0.000
fgenesh2_kg.18_#_121_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.18_#_121_#_11486_1_CFPN N 0.000
fgenesh2_kg.20_#_21_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.20_#_21_#_11486_1_CFPN N 0.000
fgenesh2_kg.9_#_513_#_11486_1_CFPN Serpula lacrymans fgenesh2_kg.9_#_513_#_11486_1_CFPN N 0.000