BRADI4G08430 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI4G08430 T33278_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI4G08430.1 RRM 36 106
BRADI4G08430.1 RRM 124 193
BRADI4G08430.1 RRM 215 284
BRADI4G08430.1 RRM 318 387

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

44 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa002620m Prunus persica ppa002620m N 0.730
mgf009542m Mimulus guttatus mgf009542m N 0.737
mgf004973m Mimulus guttatus mgf004973m N 0.705
gw1.0.426.1 Selaginella moellendorfii gw1.0.426.1 N 0.708
Glyma17g35890.1 Glycine max Glyma17g35890.1 N 0.715
Glyma14g09300.1 Glycine max Glyma14g09300.1 N 0.715
Glyma07g33860.1 Glycine max Glyma07g33860.1 N 0.747
Glyma02g11580.1 Glycine max Glyma02g11580.1 N 0.744
estExt_Genewise1.C_1260120 Physcomitrella patens estExt_Genewise1.C_1260120 N 0.705
estExt_fgenesh1_pm.C_2810008 Physcomitrella patens estExt_fgenesh1_pm.C_2810008 N 0.712
GRMZM2G102829 Zea mays GRMZM2G102829 N 0.804
GRMZM2G352129 Zea mays GRMZM2G352129 N 0.701
ppa002618m Prunus persica ppa002618m N 0.730
ppa002607m Prunus persica ppa002607m N 0.765
MDP0000497543 Malus x domestica MDP0000497543 N 0.722
MDP0000283985 Malus x domestica MDP0000283985 N 0.705
MDP0000253709 Malus x domestica MDP0000253709 N 0.722
MDP0000156895 Malus x domestica MDP0000156895 N 0.722
Medtr4g130250 Medicago truncatula Medtr4g130250 N 0.758
Medtr3g147440 Medicago truncatula Medtr3g147440 N 0.712
Medtr1g024150 Medicago truncatula Medtr1g024150 N 0.701
estExt_fgenesh1_pg.C_2570045 Physcomitrella patens estExt_fgenesh1_pg.C_2570045 N 0.733
e_gw1.51.213.1 Physcomitrella patens e_gw1.51.213.1 N 0.722
A9PEX9_POPTR Populus trichocarpa POPTR_0001s31160 N 0.758
LOC_Os09g02700 Oryza sativa LOC_Os09g02700 N 0.922
LOC_Os08g22354 Oryza sativa LOC_Os08g22354 N 0.840
GSVIVG00022079001 Vitis vinifera GSVIVG00022079001 N 0.733
GSVIVG00009455001 Vitis vinifera GSVIVG00009455001 N 0.744
BRADI3G20460 Brachypodium distachyon BRADI3G20460 N 0.805
BGIOSIBCE029001 Oryza indica BGIOSIBCE029001 N 0.922
BGIOSIBCE027387 Oryza indica BGIOSIBCE027387 N 0.840
PK02172.1 Cannabis sativa PK02172.1 N 0.747
POPTR_0002s12570 Populus trichocarpa POPTR_0002s12570 N 0.726
B9HS30_POPTR Populus trichocarpa POPTR_0009s10220 N 0.754
Cucsa.244510 Cucumis sativus Cucsa.244510 N 0.733
Cucsa.219740 Cucumis sativus Cucsa.219740 N 0.726
cassava6947.valid.m1 Manihot esculenta cassava6947.valid.m1 N 0.751
cassava17495.valid.m1 Manihot esculenta cassava17495.valid.m1 N 0.754
cassava12359.valid.m1 Manihot esculenta cassava12359.valid.m1 N 0.747
30170.m013847 Ricinus communis 30170.m013847 N 0.737
29801.m003152 Ricinus communis 29801.m003152 N 0.733
Sb02g017910 Sorghum bicolor Sb02g017910 N 0.811
B9GNU4_POPTR Populus trichocarpa POPTR_0014s02550 N 0.733
PK00659.1 Cannabis sativa PK00659.1 N 0.712