FUBP1 (Anolis carolinensis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSACAG00000006310 T18407_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHSRP
M341_0.6 		Homo sapiens Sequence logo not available nUGUrUrU RIP-chip
Cook et al.(2011)
906_17437629.2 		0.763
KHSRP
M340_0.6 		Homo sapiens Sequence logo not available UwUAUUUw RIP-chip
Cook et al.(2011)
906_17437629.1 		0.763
KHSRP
M339_0.6 		Homo sapiens Sequence logo not available UAUUUAUw RIP-chip
Cook et al.(2011)
906_17437629 		0.763
KHSRP
M342_0.6 		Homo sapiens Sequence logo not available CnsCyUCC RIP-chip
Cook et al.(2011)
906_17437629.3 		0.763
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSACAP00000006309 KH 100 162
ENSACAP00000006309 KH 185 249
ENSACAP00000006309 KH 275 337
ENSACAP00000006309 KH 376 441

Links

Other KH family RBPs
Other Anolis carolinensis RBPs

107 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A6QP83_BOVIN Bos taurus ENSBTAG00000013072 N 0.787
AAH44277 Xenopus laevis AAH44277 I 0.918
AAH60400 Xenopus laevis AAH60400 N 0.787
AAH70981 Xenopus laevis AAH70981 I 0.926
AAI61696 Xenopus laevis AAI61696 I 0.751
AAI69815 Xenopus laevis AAI69815 I 0.926
AAI69923 Xenopus laevis AAI69923 I 0.747
AAN77160 Xenopus laevis AAN77160 I 0.747
AAN77161 Xenopus laevis AAN77161 I 0.899
Ame_R003042 Ailuropoda melanoleuca Ame_R003042 N 0.791
Ame_R010564 Ailuropoda melanoleuca Ame_R010564 I 0.988
Ame_R016412 Ailuropoda melanoleuca Ame_R016412 I 0.763
ENSDARG00000007049 Danio rerio ENSDARG00000007049 N 0.756
ENSGACG00000016563 Gasterosteus aculeatus ENSGACG00000016563 I 0.869
ENSORLG00000003540 Oryzias latipes ENSORLG00000003540 I 0.872
ENSPPYG00000001219 Pongo pygmaeus ENSPPYG00000001219 I 0.988
ENSPPYG00000009454 Pongo pygmaeus ENSPPYG00000009454 I 0.763
ENSPPYG00000019693 Pongo pygmaeus ENSPPYG00000019693 N 0.791
ENSSSCG00000003767 Sus scrofa ENSSSCG00000003767 I 0.992
ENSSSCG00000003771 Sus scrofa ENSSSCG00000003771 I 0.992
ENSTRUG00000004615 Takifugu rubripes ENSTRUG00000004615 I 0.872
FUBP1 Ochotona princeps ENSOPRG00000001175 N 0.888
FUBP1 Meleagris gallopavo ENSMGAG00000009424 I 0.981
FUBP1 Loxodonta africana ENSLAFG00000003273 I 0.992
FUBP1 Macaca mulatta ENSMMUG00000002899 I 0.988
FUBP1 Pteropus vampyrus ENSPVAG00000014637 N 0.817
FUBP1 Microcebus murinus ENSMICG00000014463 N 0.837
FUBP1 Myotis lucifugus ENSMLUG00000014802 I 0.992
FUBP1 Pan troglodytes ENSPTRG00000000888 I 0.988
FUBP1 Procavia capensis ENSPCAG00000012617 I 0.992
Fubp1 Mus musculus ENSMUSG00000028034 I 0.988
FUBP1 Ornithorhynchus anatinus ENSOANG00000009777 I 0.992
FUBP1 Oryctolagus cuniculus ENSOCUG00000002225 I 0.923
FUBP1 Otolemur garnettii ENSOGAG00000014233 I 0.992
FUBP1 Gorilla gorilla ENSGGOG00000027554 I 0.988
FUBP1 Spermophilus tridecemlineatus ENSSTOG00000014312 I 0.981
FUBP1 Canis familiaris ENSCAFG00000020361 I 0.992
FUBP1 Equus caballus ENSECAG00000010867 I 0.992
Fubp1 Dipodomys ordii ENSDORG00000016534 I 0.992
fubp1 Xenopus tropicalis ENSXETG00000013137 I 0.942
fubp1 Danio rerio ENSDARG00000029248 I 0.860
FUBP1 Choloepus hoffmanni ENSCHOG00000008177 I 0.988
FUBP1 Vicugna pacos ENSVPAG00000004709 I 0.992
FUBP1 Cavia porcellus ENSCPOG00000002757 I 0.992
FUBP1 Callithrix jacchus ENSCJAG00000007062 I 0.992
FUBP1 Tursiops truncatus ENSTTRG00000000096 I 0.992
FUBP1 Taeniopygia guttata ENSTGUG00000006841 I 0.966
FUBP1 Homo sapiens ENSG00000162613 I 0.988
FUBP1 Tarsius syrichta ENSTSYG00000000148 I 0.984
FUBP3 Takifugu rubripes ENSTRUG00000018658 N 0.721
FUBP3 Oryzias latipes ENSORLG00000007103 N 0.729
FUBP3 Taeniopygia guttata ENSTGUG00000004662 N 0.783
FUBP3 Tetraodon nigroviridis ENSTNIG00000005858 N 0.767
FUBP3 Oryzias latipes ENSORLG00000017565 N 0.764
Fubp3 Rattus norvegicus ENSRNOG00000009139 N 0.787
FUBP3 Procavia capensis ENSPCAG00000001717 N 0.767
FUBP3 Tetraodon nigroviridis ENSTNIG00000009019 N 0.733
FUBP3 Takifugu rubripes ENSTRUG00000013259 N 0.756
fubp3 Xenopus tropicalis ENSXETG00000001344 N 0.787
FUBP3 Pteropus vampyrus ENSPVAG00000001510 N 0.795
FUBP3 Pan troglodytes ENSPTRG00000021474 N 0.791
FUBP3 Cavia porcellus ENSCPOG00000010315 N 0.795
FUBP3 Gasterosteus aculeatus ENSGACG00000016704 N 0.740
FUBP3 Felis catus ENSFCAG00000005113 N 0.783
FUBP3 Gorilla gorilla ENSGGOG00000011318 N 0.791
FUBP3 Loxodonta africana ENSLAFG00000011611 N 0.787
FUBP3 Dasypus novemcinctus ENSDNOG00000014533 N 0.775
FUBP3 Meleagris gallopavo ENSMGAG00000005342 N 0.787
FUBP3 Microcebus murinus ENSMICG00000015452 N 0.795
FUBP3 Myotis lucifugus ENSMLUG00000008743 N 0.752
FUBP3 Macaca mulatta ENSMMUG00000008249 N 0.791
FUBP3 Ornithorhynchus anatinus ENSOANG00000001042 N 0.791
FUBP3 Ochotona princeps ENSOPRG00000008648 N 0.787
FUBP3 Monodelphis domestica ENSMODG00000012105 N 0.775
FUBP3 Homo sapiens ENSG00000107164 N 0.791
FUBP3 Canis familiaris ENSCAFG00000019942 N 0.787
Fubp3 Mus musculus ENSMUSG00000026843 N 0.783
KHSRP Anolis carolinensis ENSACAG00000015398 I 0.763
KHSRP Felis catus ENSFCAG00000003731 I 0.763
KHSRP Tursiops truncatus ENSTTRG00000010390 I 0.763
Khsrp Dipodomys ordii ENSDORG00000002447 I 0.759
Khsrp Mus musculus ENSMUSG00000007670 I 0.763
KHSRP Danio rerio ENSDARG00000026489 I 0.732
KHSRP Cavia porcellus ENSCPOG00000005140 I 0.763
KHSRP Canis familiaris ENSCAFG00000018667 I 0.763
KHSRP Callithrix jacchus ENSCJAG00000016627 I 0.763
KHSRP Sus scrofa ENSSSCG00000013538 I 0.763
KHSRP Gasterosteus aculeatus ENSGACG00000012422 I 0.724
KHSRP Ochotona princeps ENSOPRG00000010594 I 0.759
KHSRP Oryzias latipes ENSORLG00000011882 I 0.704
KHSRP Monodelphis domestica ENSMODG00000001952 I 0.712
KHSRP Macaca mulatta ENSMMUG00000005597 I 0.763
KHSRP Pan troglodytes ENSPTRG00000010364 I 0.763
KHSRP Pteropus vampyrus ENSPVAG00000007251 I 0.763
KHSRP Microcebus murinus ENSMICG00000007863 I 0.759
KHSRP Macropus eugenii ENSMEUG00000016601 I 0.720
KHSRP Loxodonta africana ENSLAFG00000002426 I 0.763
KHSRP Homo sapiens ENSG00000088247 D 0.763
KHSRP Gorilla gorilla ENSGGOG00000007028 I 0.763
KHSRP Spermophilus tridecemlineatus ENSSTOG00000002371 I 0.763
LOC100065608 Equus caballus ENSECAG00000018305 I 0.763
LOC100069755 Equus caballus ENSECAG00000011500 N 0.764
LOC100399862 Callithrix jacchus ENSCJAG00000020542 N 0.795
LOC505564 Bos taurus ENSBTAG00000021018 I 0.763
Q08DJ3_BOVIN Bos taurus ENSBTAG00000008926 I 0.992
Q5ZHW0_CHICK Gallus gallus ENSGALG00000008939 I 0.981
Q5ZM76_CHICK Gallus gallus ENSGALG00000003941 N 0.787