rbp28 (Schizosaccharomyces pombe)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 SPAC2C4.11c T20292_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SPAC2C4.11c-1 KH 165 214

Links

Other KH family RBPs
Other Schizosaccharomyces pombe RBPs

201 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
20359_YOR145C Saccharomyces mikatae 20359_YOR145C N 0.824
20872_YOR145C Saccharomyces paradoxus 20872_YOR145C N 0.840
23888_YOR145C Saccharomyces bayanus 23888_YOR145C N 0.840
28525.m000262 Ricinus communis 28525.m000262 N 0.720
3712.m00082 Tetrahymena thermophila 3712.m00082 N 0.740
A7THL8_VANPO Vanderwaltozyma polyspora A7THL8_VANPO N 0.860
AAH42279 Xenopus laevis AAH42279 N 0.740
AAQ24169 Xenopus laevis AAQ24169 N 0.740
ACLA_088200 Aspergillus clavatus CADACLAG00008695 N 0.700
AFLA_037860 Aspergillus flavus CADAFLAG00003159 N 0.706
AMAG_12889 Allomyces macrogynus AMAG_12889 N 0.840
AMAG_14219 Allomyces macrogynus AMAG_14219 N 0.840
amel4_ncbi_hmm14037 Apis mellifera amel4_ncbi_hmm14037 N 0.700
Ame_R013855 Ailuropoda melanoleuca Ame_R013855 N 0.740
AMSG_02733 Thecamonas trahens AMSG_02733 N 0.720
ANIA_05785 Aspergillus nidulans CADANIAG00003265 N 0.720
AO090003000014 Aspergillus oryzae CADAORAG00000701 N 0.706
ARB_00984 Arthroderma benhamiae ARB_00984 N 0.760
ATEG_07413 Aspergillus terreus CADATEAG00001505 N 0.720
B9GHH7_POPTR Populus trichocarpa POPTR_0001s47320 N 0.720
B9N5M8_POPTR Populus trichocarpa POPTR_0011s16880 N 0.720
BC1G_12211 Botrytis cinerea BC1G_12211 N 0.800
BDBG_01721 Blastomyces dermatitidis BDBG_01721 N 0.740
BGIOSIBCE009391 Oryza indica BGIOSIBCE009391 N 0.700
Bm1_42995 Brugia malayi Bm1_42995 N 0.700
BRADI2G52180 Brachypodium distachyon BRADI2G52180 N 0.700
CAGL0K09460g Candida glabrata CAGL0K09460g N 0.860
cassava30594.valid.m1 Manihot esculenta cassava30594.valid.m1 N 0.740
cassava7030.valid.m1 Manihot esculenta cassava7030.valid.m1 N 0.720
Cd36_35296 Candida dubliniensis Cd36_35296 N 0.860
Chlre2_kg.scaffold_20000177 Chlamydomonas reinhardtii Chlre2_kg.scaffold_20000177 N 0.740
CIMG_07268 Coccidioides immitis CIMG_07268 N 0.800
CLUG_01545 Candida lusitaniae CLUG_01545 N 0.860
CMF059C Cyanidioschyzon merolae CMF059C N 0.740
CNBG_1323 Cryptococcus neoformans CNBG_1323 N 0.760
CPAG_01545 Candida parapsilosis CPAG_01545 N 0.860
CPSG_08784 Coccidioides posadasii CPSG_08784 N 0.800
CTRG_05813 Candida tropicalis CTRG_05813 N 0.860
Cucsa.041830 Cucumis sativus Cucsa.041830 N 0.720
Cucsa.201760 Cucumis sativus Cucsa.201760 N 0.720
DEHA0G05258g Debaryomyces hansenii DEHA0G05258g N 0.860
DGIL_AUG5s4501g8t1 Acyrtosiphon pisum DGIL_AUG5s4501g8t1 N 0.700
EAT88982.1 Phaeosphaeria nodorum EAT88982.1 N 0.780
EDP42908.1 Malassezia globosa EDP42908.1 N 0.780
EFA79428.1 Polysphondylium pallidum EFA79428.1 N 0.720
ENSCJAG00000022611 Callithrix jacchus ENSCJAG00000022611 N 0.740
ENSOCUG00000006100 Oryctolagus cuniculus ENSOCUG00000006100 N 0.740
ENSOCUG00000022236 Oryctolagus cuniculus ENSOCUG00000022236 N 0.740
ENSPPYG00000012353 Pongo pygmaeus ENSPPYG00000012353 N 0.740
estExt_fgenesh1_kg.C_140013 Cochliobolus heterostrophus C5 estExt_fgenesh1_kg.C_140013 N 0.820
estExt_fgenesh1_pg.C_110137 Monosiga brevicollis estExt_fgenesh1_pg.C_110137 N 0.720
estExt_fgenesh1_pg.C_190237 Phytophthora capsici estExt_fgenesh1_pg.C_190237 N 0.740
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036 Nectria haematococca estExt_fgenesh1_pg.C_sca_1_chr1_3_00036 N 0.800
estExt_fgenesh2_kg.C_20130 Agaricus bisporus estExt_fgenesh2_kg.C_20130 N 0.780
estExt_fgenesh5_pg.C_40050 Trichoderma reesei estExt_fgenesh5_pg.C_40050 N 0.820
estExt_Genewise1.C_10689 Thielavia terrestris estExt_Genewise1.C_10689 N 0.700
estExt_Genewise1.C_260084 Melampsora laricis populina estExt_Genewise1.C_260084 N 0.760
estExt_Genewise1.C_5820041 Capitella teleta estExt_Genewise1.C_5820041 N 0.720
estExt_Genewise1Plus.C_10658 Mucor circinelloides estExt_Genewise1Plus.C_10658 N 0.800
estExt_Genewise1Plus.C_10659 Myceliophthora thermophila estExt_Genewise1Plus.C_10659 N 0.720
estExt_Genewise1Plus.C_250095 Phycomyces blakesleeanus estExt_Genewise1Plus.C_250095 N 0.760
estExt_Genewise1Plus.C_600117 Volvox carteri estExt_Genewise1Plus.C_600117 N 0.740
estExt_Genewise1Plus.C_91132 Trichoderma virens estExt_Genewise1Plus.C_91132 N 0.820
estExt_Genewise1Plus.C_chr_70397 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_70397 N 0.800
estExt_genewise1_human.C_chr_1.20929 Pichia stipitis estExt_genewise1_human.C_chr_1.20929 N 0.860
e_gw1.12.287.1 Serpula lacrymans e_gw1.12.287.1 N 0.820
e_gw1.15.315.1 Tremella mesenterica e_gw1.15.315.1 N 0.800
e_gw1.2.2126.1 Schizophyllum commune e_gw1.2.2126.1 N 0.840
e_gw1.2.756.1 Heterobasidion annosum e_gw1.2.756.1 N 0.800
e_gw1.226.39.1 Physcomitrella patens e_gw1.226.39.1 N 0.720
e_gw1.3.1059.1 Mycosphaerella fijiensis e_gw1.3.1059.1 N 0.820
e_gw1.3.2749.1 Cryphonectria parasitica e_gw1.3.2749.1 N 0.800
e_gw1.8.261.1 Sporobolomyces roseus e_gw1.8.261.1 N 0.800
e_gwh1.2.512.1 Laccaria bicolor e_gwh1.2.512.1 N 0.780
e_gww2.1.865.1 Phanerochaete chrysosporium e_gww2.1.865.1 N 0.840
fgenesh1_kg.C_scaffold_5000048 Selaginella moellendorfii fgenesh1_kg.C_scaffold_5000048 N 0.780
fgenesh1_pg.C_scaffold_107000027 Daphnia pulex fgenesh1_pg.C_scaffold_107000027 N 0.700
fgenesh1_pg.scaffold_18000119 Nematostella vectensis fgenesh1_pg.scaffold_18000119 N 0.720
fgenesh1_pm.C_scaffold_14000035 Trichoderma atroviride fgenesh1_pm.C_scaffold_14000035 N 0.820
fgenesh1_pm.C_scaffold_5000030 Phytophthora ramorum fgenesh1_pm.C_scaffold_5000030 N 0.760
fgenesh2_pg.scaffold_196000015 Branchiostoma floridae fgenesh2_pg.scaffold_196000015 N 0.720
fgenesh2_pm.scaffold_78000001 Branchiostoma floridae fgenesh2_pm.scaffold_78000001 N 0.720
fgenesh3_pm.54__15 Postia placenta fgenesh3_pm.54__15 N 0.840
fgeneshCV_pg.C_scaffold_11000142 Chlorella vulgaris fgeneshCV_pg.C_scaffold_11000142 N 0.720
fgeneshTA2_pg.C_scaffold_14000176 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_14000176 N 0.800
FGSG_01345 Fusarium graminearum FGSG_01345 N 0.800
FOXG_00036 Fusarium oxysporum FOXG_00036 N 0.800
FVEG_01480 Fusarium verticillioides FVEG_01480 N 0.800
Genemark1.5719_g Coccomyxa C 169 Genemark1.5719_g N 0.720
GID1.0042265 Dictyostelium purpureum GID1.0042265 N 0.700
Glyma08g44800.1 Glycine max Glyma08g44800.1 N 0.760
Glyma18g08080.1 Glycine max Glyma18g08080.1 N 0.760
Glyma18g08100.1 Glycine max Glyma18g08100.1 N 0.760
GP3.070330 Batrachochytrium dendrobatidis GP3.070330 N 0.720
GRMZM2G085005 Zea mays GRMZM2G085005 N 0.700
GRMZM2G139198 Zea mays GRMZM2G139198 N 0.700
GSPATP00020703001 Paramecium tetraurelia GSPATP00020703001 N 0.720
GSPATP00021981001 Paramecium tetraurelia GSPATP00021981001 N 0.720
GSTUMT00003923001 Tuber melanosporum GSTUMT00003923001 N 0.800
gw1.1.2472.1 Pleurotus ostreatus gw1.1.2472.1 N 0.820
HCAG_04100 Histoplasma capsulatum HCAG_04100 N 0.760
KLLA0C06446g Kluyveromyces lactis KLLA0C06446g N 0.840
KLTH0G02574g Kluyveromyces thermotolerans KLTH0G02574g N 0.840
Kwal_18864 Kluyveromyces waltii Kwal_18864 N 0.840
LELG_05249 Lodderomyces elongisporus LELG_05249 N 0.860
LjSGA_017760.2 Lotus japonicus LjSGA_017760.2 N 0.780
LOAG_05624 Loa loa LOAG_05624 N 0.700
LOC100061904 Equus caballus ENSECAG00000011263 N 0.740
LOC100389955 Callithrix jacchus ENSCJAG00000006564 N 0.740
LOC_Os01g57910 Oryza sativa LOC_Os01g57910 N 0.700
LOC_Os03g02420 Oryza sativa LOC_Os03g02420 N 0.700
MCYG_07269 Microsporum canis MCYG_07269 N 0.760
MDP0000120063 Malus x domestica MDP0000120063 N 0.720
MDP0000136407 Malus x domestica MDP0000136407 N 0.720
MDP0000265633 Malus x domestica MDP0000265633 N 0.720
MDP0000754021 Malus x domestica MDP0000754021 N 0.720
Medtr3g080390 Medicago truncatula Medtr3g080390 N 0.740
mgf006621m Mimulus guttatus mgf006621m N 0.700
MGG_05136 Magnaporthe oryzae MGG_05136 N 0.720
MGYG_04767 Microsporum gypseum MGYG_04767 N 0.760
orf19.7618 Candida albicans orf19.7618 N 0.860
PABG_01374 Paracoccidioides brasiliensis PABG_01374 N 0.740
Pc14g01220 Penicillium chrysogenum Pc14g01220 N 0.780
PDK_20s1552091g001 Phoenix dactylifera PDK_20s1552091g001 N 0.700
PDK_20s1554761g001 Phoenix dactylifera PDK_20s1554761g001 N 0.700
PGUG_02960 Candida guilliermondii PGUG_02960 N 0.840
PHUM356890 Pediculus humanus PHUM356890 N 0.700
PITG_01680 Phytophthora infestans PITG_01680 N 0.760
PK08146.1 Cannabis sativa PK08146.1 N 0.720
PMAA_046470 Penicillium marneffei PMAA_046470 N 0.700
PNO1 Ashbya gossypii PNO1 N 0.840
PNO1 Cavia porcellus ENSCPOG00000010130 N 0.740
PNO1 Canis familiaris ENSCAFG00000003256 N 0.740
PNO1 Anolis carolinensis ENSACAG00000001218 N 0.760
pno1 Dictyostelium discoideum DDB_G0287557 N 0.700
pno1 Danio rerio ENSDARG00000008502 N 0.740
Pno1 Dipodomys ordii ENSDORG00000006867 N 0.740
PNO1 Tursiops truncatus ENSTTRG00000014002 N 0.740
PNO1 Takifugu rubripes ENSTRUG00000012470 N 0.720
PNO1 Tetraodon nigroviridis ENSTNIG00000009825 N 0.720
PNO1 Taeniopygia guttata ENSTGUG00000002369 N 0.760
PNO1 Sus scrofa ENSSSCG00000008352 N 0.740
Pno1 Rattus norvegicus ENSRNOG00000005524 N 0.740
PNO1 Pteropus vampyrus ENSPVAG00000012695 N 0.740
PNO1 Pan troglodytes ENSPTRG00000011999 N 0.740
PNO1 Procavia capensis ENSPCAG00000016146 N 0.740
PNO1 Ochotona princeps ENSOPRG00000009643 N 0.740
PNO1 Ornithorhynchus anatinus ENSOANG00000008388 N 0.740
Pno1 Mus musculus ENSMUSG00000020116 N 0.720
PNO1 Monodelphis domestica ENSMODG00000003567 N 0.740
PNO1 Microcebus murinus ENSMICG00000010897 N 0.740
PNO1 Vicugna pacos ENSVPAG00000012083 N 0.740
PNO1 Erinaceus europaeus ENSEEUG00000009611 N 0.740
PNO1 Homo sapiens ENSG00000115946 N 0.740
PNO1 Gasterosteus aculeatus ENSGACG00000012047 N 0.700
PNO1 Myotis lucifugus ENSMLUG00000010850 N 0.740
PNO1 Gorilla gorilla ENSGGOG00000009158 N 0.740
PNO1 Loxodonta africana ENSLAFG00000000046 N 0.740
PNO1 Macropus eugenii ENSMEUG00000004504 N 0.740
PNO1 Meleagris gallopavo ENSMGAG00000004514 N 0.780
PNO1 Saccharomyces cerevisiae YOR145C N 0.840
pno1 Xenopus tropicalis ENSXETG00000017349 N 0.780
PNO1_BOVIN Bos taurus ENSBTAG00000010604 N 0.740
PNO1_CHICK Gallus gallus ENSGALG00000009093 N 0.780
ppa009897m Prunus persica ppa009897m N 0.720
ppa011086m Prunus persica ppa011086m N 0.720
PTRG_02803 Pyrenophora tritici repentis PTRG_02803 N 0.760
PTSG_04415 Salpingoeca rosetta PTSG_04415 N 0.700
PTTG_01898 Puccinia triticina PTTG_01898 N 0.800
Q6VBQ6_ORYLA Oryzias latipes ENSORLG00000002371 N 0.740
Q7YRC8_MACMU Macaca mulatta ENSMMUG00000017461 N 0.740
Q8AVH4 Xenopus laevis Q8AVH4 N 0.740
RO3G_00885 Rhizopus oryzae RO3G_00885 N 0.820
RO3G_05288 Rhizopus oryzae RO3G_05288 N 0.820
SAKL0G03740g Lachancea kluyveri SAKL0G03740g N 0.860
SB03G036840 Sorghum bicolor Sb03g036840 N 0.700
Scas_Contig632.19 Saccharomyces castellii Scas_Contig632.19 N 0.840
SJAG_03872 Schizosaccharomyces japonicus SJAG_03872 N 0.920
Skud_Contig1833.8 Saccharomyces kudriavzevii Skud_Contig1833.8 N 0.840
SNOG_03777 Stagonospora nodorum SNOG_03777 N 0.780
SOCG_04140 Schizosaccharomyces octosporus SOCG_04140 N 0.920
SPOG_00402 Schizosaccharomyces cryophilus SPOG_00402 N 0.920
SPPG_04498 Spizellomyces punctatus SPPG_04498 N 0.720
SPRG_02415 Saprolegnia parasitica SPRG_02415 N 0.760
SS1G_04290 Sclerotinia sclerotiorum SS1G_04290 N 0.800
s_468317 Phytophthora sojae s_468317 N 0.760
TEQG_07954 Trichophyton equinum TEQG_07954 N 0.760
TERG_01665 Trichophyton rubrum TERG_01665 N 0.760
TESG_04215 Trichophyton tonsurans TESG_04215 N 0.760
TRV_03730 Trichophyton verrucosum TRV_03730 N 0.760
UM03495 Ustilago maydis UM03495 N 0.760
UREG_07832 Uncinocarpus reesii UREG_07832 N 0.780
WUBG_12774 Wuchereria bancrofti WUBG_12774 N 0.700
XM_001095777.1 Macaca mulatta ENSMMUG00000030357 N 0.740
XP_001202155.1 Strongylocentrotus purpuratus XP_001202155.1 N 0.760
XP_001202160.1 Strongylocentrotus purpuratus XP_001202160.1 N 0.760
XP_002162789.1 Hydra magnipapillata XP_002162789.1 N 0.760
XP_791733.2 Strongylocentrotus purpuratus XP_791733.2 N 0.760
XP_798188.2 Strongylocentrotus purpuratus XP_798188.2 N 0.760
YALI0E01122g Yarrowia lipolytica YALI0E01122g N 0.820
ZYRO0D11440g Zygosaccharomyces rouxii ZYRO0D11440g N 0.840