Brunol4 (Rattus norvegicus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSRNOG00000014503 T41095_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
bru-3
M117_0.6 		Drosophila melanogaster KUGKUGU RNAcompete
Ray et al.(2013)
RNCMPT00122 		0.871
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000019548 RRM 3 71
ENSRNOP00000019548 RRM 257 293
ENSRNOP00000057864 RRM 3 71
ENSRNOP00000057864 RRM 272 342

Links

Other RRM family RBPs
Other Rattus norvegicus RBPs

66 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
62054 Helobdella robusta 62054 I 0.786
90208 Helobdella robusta 90208 I 0.780
A5A2G2_CHICK Gallus gallus ENSGALG00000002413 I 0.986
A5A2G4_CHICK Gallus gallus ENSGALG00000001966 I 0.921
AAEL014033 Aedes aegypti AAEL014033 I 0.871
AGAP004950 Anopheles gambiae AGAP004950 I 0.871
amel4_ncbi_hmm7761 Apis mellifera amel4_ncbi_hmm7761 I 0.893
BGIBMGA010431 Bombyx mori BGIBMGA010431 I 0.700
bru-3 Drosophila melanogaster FBgn0262350 D 0.871
BRUNOL4 Taeniopygia guttata ENSTGUG00000001649 I 0.986
BRUNOL6 Homo sapiens ENSG00000140488 D 0.821
CELF2 Ornithorhynchus anatinus ENSOANG00000015432 I 0.707
CELF2 Gorilla gorilla ENSGGOG00000009330 I 0.707
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.836
CELF3 Tupaia belangeri ENSTBEG00000010130 I 0.721
CELF4 Sus scrofa ENSSSCG00000003748 N 0.838
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.993
CELF4 Monodelphis domestica ENSMODG00000000306 N 1.000
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.817
Celf4 Mus musculus ENSMUSG00000024268 I 0.817
CELF4 Tupaia belangeri ENSTBEG00000010647 I 0.817
CELF5 Monodelphis domestica ENSMODG00000019151 I 0.893
CELF5 Ochotona princeps ENSOPRG00000007881 I 0.850
CELF5 Gasterosteus aculeatus ENSGACG00000012870 I 0.871
CELF5 Macaca mulatta ENSMMUG00000015513 I 0.700
CELF5 Anolis carolinensis ENSACAG00000016959 I 0.893
CELF5 Callithrix jacchus ENSCJAG00000014799 I 0.886
CELF5 Takifugu rubripes ENSTRUG00000017937 I 0.879
CELF5 Cavia porcellus ENSCPOG00000005740 I 0.886
CELF5 Gorilla gorilla ENSGGOG00000002078 I 0.865
CELF5 Tetraodon nigroviridis ENSTNIG00000010634 I 0.879
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.821
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.929
CELF6 Oryzias latipes ENSORLG00000013392 I 0.914
CELF6 Ochotona princeps ENSOPRG00000019169 I 0.829
Celf6 Mus musculus ENSMUSG00000032297 I 0.829
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.900
CELF6 Gasterosteus aculeatus ENSGACG00000016626 I 0.907
CELF6 Takifugu rubripes ENSTRUG00000012391 I 0.907
CJA07020 Caenorhabditis japonica CJA07020 I 0.750
ENSCAFG00000017759 Canis familiaris ENSCAFG00000017759 N 0.823
ENSGGOG00000023049 Gorilla gorilla ENSGGOG00000023049 I 0.800
estExt_fgenesh2_pg.C_sca_1310025 Lottia gigantea estExt_fgenesh2_pg.C_sca_1310025 I 0.800
GA28624-RA Drosophila pseudoobscura FBgn0249984 I 0.864
GD12651 Drosophila simulans FBgn0184378 I 0.871
GE20053 Drosophila yakuba FBgn0237378 I 0.871
GF10965 Drosophila ananassae FBgn0088005 I 0.871
GG13757 Drosophila erecta FBgn0106020 I 0.871
GH14684 Drosophila grimshawi FBgn0122160 I 0.864
GI13095 Drosophila mojavensis FBgn0135852 I 0.864
GJ13842 Drosophila virilis FBgn0201061 I 0.864
GK17101 Drosophila willistoni FBgn0219100 I 0.871
GL21647 Drosophila persimilis FBgn0159240 I 0.843
GM24582 Drosophila sechellia FBgn0179445 I 0.871
HEXA Macaca mulatta ENSMMUG00000010687 I 0.821
LOAG_05508 Loa loa LOAG_05508 I 0.793
LOC100386457 Callithrix jacchus ENSCJAG00000021135 I 0.817
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.707
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.821
nasonia_NCBI_hmm496514 Nasonia vitripennis nasonia_NCBI_hmm496514 I 0.857
PHUM315130 Pediculus humanus PHUM315130 I 0.900
Q2KI16_BOVIN Bos taurus ENSBTAG00000008937 I 0.707
Sjc_0024790 Schistosoma japonicum Sjc_0024790 I 0.750
Smp_041280 Schistosoma mansoni Smp_041280 I 0.821
Smp_131780 Schistosoma mansoni Smp_131780 I 0.750