GF21392 (Drosophila ananassae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0098394 T43291_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
fne
M115_0.6 		Drosophila melanogaster UUKDGUU RNAcompete
Ray et al.(2013)
RNCMPT00120 		0.982
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0124584 RRM 28 64
FBpp0124584 RRM 70 113
FBpp0124584 RRM 129 197
FBpp0124584 RRM 272 342

Links

Other RRM family RBPs
Other Drosophila ananassae RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
107863 Helobdella robusta 107863 N 0.000
AAEL013948 Aedes aegypti AAEL013948 N 0.000
AAI23372 Xenopus laevis AAI23372 N 0.000
AGAP009810 Anopheles gambiae AGAP009810 N 0.000
amel4_ncbi_hmm1701 Apis mellifera amel4_ncbi_hmm1701 N 0.000
amel4_ncbi_hmm1701 Tribolium castaneum amel4_ncbi_hmm1701 N 0.000
amel4_ncbi_hmm44329 Apis mellifera amel4_ncbi_hmm44329 N 0.000
Ame_R020475 Ailuropoda melanoleuca Ame_R020475 N 0.000
Aqu1.226474 Amphimedon queenslandica Aqu1.226474 N 0.000
BGIBMGA003414 Bombyx mori BGIBMGA003414 N 0.000
Bm1_52100 Brugia malayi Bm1_52100 N 0.000
CAOG_01587 Capsaspora owczarzaki CAOG_01587 N 0.000
CBG00420 Caenorhabditis briggsae CBG00420 N 0.000
CBN02296 Caenorhabditis brenneri CBN02296 N 0.000
CJA08769 Caenorhabditis japonica CJA08769 N 0.000
CPIJ008841 Culex quinquefasciatus CPIJ008841 N 0.000
CpipJ_CPIJ008841 Culex pipiens CpipJ_CPIJ008841 N 0.000
CRE28739 Caenorhabditis remanei CRE28739 N 0.000
cyn-13 Caenorhabditis elegans Y116A8C.34 N 0.000
cyp33 Drosophila melanogaster FBgn0028382 N 0.000
DGIL_AUG5s585g5t1 Acyrtosiphon pisum DGIL_AUG5s585g5t1 N 0.000
ENSCING00000003116 Ciona intestinalis ENSCING00000003116 N 0.000
ENSCSAVG00000006547 Ciona savignyi ENSCSAVG00000006547 N 0.000
ENSMLUG00000006201 Myotis lucifugus ENSMLUG00000006201 N 0.000
ENSPPYG00000001501 Pongo pygmaeus ENSPPYG00000001501 N 0.000
estExt_fgenesh2_kg.C_sca_1160007 Lottia gigantea estExt_fgenesh2_kg.C_sca_1160007 N 0.000
estExt_fgeneshTA2_pm.C_70022 Trichoplax adhaerens estExt_fgeneshTA2_pm.C_70022 N 0.000
estExt_gwp.C_1130042 Nematostella vectensis estExt_gwp.C_1130042 N 0.000
estExt_gwp.C_2960041 Branchiostoma floridae estExt_gwp.C_2960041 N 0.000
estExt_gwp.C_5080019 Branchiostoma floridae estExt_gwp.C_5080019 N 0.000
GA18502-RA Drosophila pseudoobscura FBgn0078504 N 0.000
GD11288 Drosophila simulans FBgn0183037 N 0.000
GE11871 Drosophila yakuba FBgn0229657 N 0.000
GF11346 Drosophila ananassae FBgn0088386 N 0.000
GG21795 Drosophila erecta FBgn0113973 N 0.000
GH20760 Drosophila grimshawi FBgn0128223 N 0.000
GI20843 Drosophila mojavensis FBgn0143577 N 0.000
GJ20579 Drosophila virilis FBgn0207718 N 0.000
GK21899 Drosophila willistoni FBgn0223884 N 0.000
GL11464 Drosophila persimilis FBgn0149073 N 0.000
GM21798 Drosophila sechellia FBgn0176676 N 0.000
ISCW002449 Ixodes scapularis ISCW002449 N 0.000
LOAG_00807 Loa loa LOAG_00807 N 0.000
LOC100054084 Equus caballus ENSECAG00000008955 N 0.000
LOC100054282 Equus caballus ENSECAG00000024285 N 0.000
LOC100400545 Callithrix jacchus ENSCJAG00000002589 N 0.000
nasonia_NCBI_hmm78483 Nasonia vitripennis nasonia_NCBI_hmm78483 N 0.000
PHUM293600 Pediculus humanus PHUM293600 N 0.000
Ppa-cyn-13 Pristionchus pacificus PPA01466 N 0.000
PPIE Cavia porcellus ENSCPOG00000007365 N 0.000
PPIE Taeniopygia guttata ENSTGUG00000001276 N 0.000
PPIE Anolis carolinensis ENSACAG00000002688 N 0.000
ppie Danio rerio ENSDARG00000059270 N 0.000
PPIE Macropus eugenii ENSMEUG00000005090 N 0.000
PPIE Microcebus murinus ENSMICG00000016676 N 0.000
PPIE Canis familiaris ENSCAFG00000003031 N 0.000
PPIE Dasypus novemcinctus ENSDNOG00000002404 N 0.000
PPIE Tursiops truncatus ENSTTRG00000014385 N 0.000
Ppie Mus musculus ENSMUSG00000028651 N 0.000
PPIE Monodelphis domestica ENSMODG00000017659 N 0.000
PPIE Macaca mulatta ENSMMUG00000018869 N 0.000
PPIE Myotis lucifugus ENSMLUG00000016233 N 0.000
PPIE Erinaceus europaeus ENSEEUG00000010232 N 0.000
PPIE Loxodonta africana ENSLAFG00000028312 N 0.000
PPIE Gorilla gorilla ENSGGOG00000015783 N 0.000
PPIE Gallus gallus ENSGALG00000013383 N 0.000
PPIE Gasterosteus aculeatus ENSGACG00000007165 N 0.000
PPIE Homo sapiens ENSG00000084072 N 0.000
PPIE Ornithorhynchus anatinus ENSOANG00000010003 N 0.000
PPIE Oryctolagus cuniculus ENSOCUG00000007665 N 0.000
PPIE Otolemur garnettii ENSOGAG00000003620 N 0.000
PPIE Tarsius syrichta ENSTSYG00000000401 N 0.000
PPIE Tetraodon nigroviridis ENSTNIG00000016901 N 0.000
PPIE Spermophilus tridecemlineatus ENSSTOG00000010445 N 0.000
PPIE Sus scrofa ENSSSCG00000003664 N 0.000
PPIE Sorex araneus ENSSARG00000005703 N 0.000
Ppie Rattus norvegicus ENSRNOG00000014762 N 0.000
PPIE Pteropus vampyrus ENSPVAG00000002120 N 0.000
PPIE Pan troglodytes ENSPTRG00000000577 N 0.000
PPIE Oryzias latipes ENSORLG00000017469 N 0.000
PPIE Felis catus ENSFCAG00000006027 N 0.000
Q8QGJ6_FUGRU Takifugu rubripes ENSTRUG00000006308 N 0.000
Sjc_0059010 Schistosoma japonicum Sjc_0059010 N 0.000
Smp_094810 Schistosoma mansoni Smp_094810 N 0.000
SNAPOd2T00024835001 Oikopleura dioica SNAPOd2T00024835001 N 0.000
WUBG_08965 Wuchereria bancrofti WUBG_08965 N 0.000
XP_001175534.1 Strongylocentrotus purpuratus XP_001175534.1 N 0.000
XP_002154334.1 Hydra magnipapillata XP_002154334.1 N 0.000
XP_002168022.1 Hydra magnipapillata XP_002168022.1 N 0.000
XP_799104.2 Strongylocentrotus purpuratus XP_799104.2 N 0.000